NONHSAT037087
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037087 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3987 nt |
Genomic location |
chr14+:57822164..57826128 |
Exon number |
1 |
Exons |
57822164..57826128 |
Genome context |
|
Sequence |
000001 TGCTCTGGGA CCTTAACCCT AAGAAAAGCT ATGAAACTAT TGCTACCTCT GCACATGATC ATCTTCATGA TACTCATGCT 000080
000081 CTAATTGATC ATGACACTGT GTCCCAGATT TGTCCTTAGA ATCCTTTTCA TCATGCTACA TGTAGCCACT AATTTTCAGT 000160 000161 TGCATTTGCT ACAAGAGAAG CCCATTCAGC ATGGTTTGTT CAAATGGGGG AGGGGGCTAG GAGGCTGGGA GGAGGCAGGG 000240 000241 GTAAGGGAAG GGATTCATTA ACAAGAGGGG ACCAGGCACA GAGGAAGAGG GAGTCCTACA GGCATAAAGA ATGCTAAATT 000320 000321 TGAAAAGAGC AAAGAGTTTT CAACACCGTA AGAAAGAAAA AAAGTTTACC AAATCTGATG GCCTTTTTCC TTTCATAGTT 000400 000401 ACACCAATAC TATACGTGTC ATACTTAAGA ATATTTGTTC TTATAAGAAA AGAACACAAT AGACTTGAAG TCTGGAGATC 000480 000481 GAATGTTATT CCTGTTTTAC TTCAACTAAC CACTCTGGTT GACCTGGTAC TTTCCTTTGA GGTTTTCTTT TATGTATTTG 000560 000561 TTTTACTGTA TATTTAAATA CACACATGTG TGTATGTATG TGTGTATCTG TTCCTGCTAA CAAAAGCAAT TTATTCTTAT 000640 000641 TTTGAAATTT CAACTATTAG TAAGACATAT AATGGAAAAA ATAAGTAAAG ATCCCCCATA ATATCTCTCC TAGAGAAAAA 000720 000721 CCACTCAGTG ATTTGGTGTC CATTCCTTCA TTTTTTTTTT CTATTAACAT TTAGTTTAGT CCTTTTAACA ACTGCATAGT 000800 000801 ATTCCACTAT TAGAATGCAT CATATTTTAT TTAACCACTA CTGATGGACT TTTGAGTTGG GGACAGTATT GTCTTATTAC 000880 000881 AAGTAGTGCT TTAGTAAACA TCCTAATATA TATGTTTTTG TGCATTTGTG CAAGTATTTC TCCAGAGAAA ATTTCTATAA 000960 000961 GTGAAATTGC AGGATTGGAG AGTATGCACA CTTAAAGTTT TAATAGATCT CCAAATACGT CATATCAAGG TAGACTCTCA 001040 001041 GTAGCAGTGT ATTAGACTGC ATATTTCTGG TTTGTTTTTT AAGGAACATG AAAACAATGA GAAAAAGTGT TTAAAGATTA 001120 001121 GGCTCCTATA TTCTTAGGCC ACAGTACTTA ATAGGCAAAA AATAATCATG TCTCCAAGGG GAGTAATATC ACAGCTGTGG 001200 001201 GTTGTCAGGA CGTCACAACC AGTAACAAAT CTCACAATGT ACCTTCTTGT ACATTTCATT GATTTCTGAG ATTCCTCAGC 001280 001281 ATTATTGGAA TGGAAGAATA CGATAGTATT TATATGGTTT CACATTAAAA AGTGAGATAA AAGGAGGAAA GTAAAACTTG 001360 001361 TTTATGTTGT AATTTTTATT CCTTGCTTCA TCTTCAGTTC TAACGCTCAG TCTCAAGATC AGGACAGCAC ATTATTGGTA 001440 001441 ATAATGTAAT ATAAAAATTT AGGTTCCTAA AAGTGACAAC CTATTTTCTT CACCAAGTAT CAGTGTTTAA GAAAAAACAA 001520 001521 CTAAACAACA AATTTGGGTA GAAAAACATA TGCCTCTTCA AAATTACTTA TTGTTTTTAG TTTAAACACT TACAACACTG 001600 001601 CCTAGCCTTG TGTGACTTTT GTATAAAATA GTGAGCAAGT GTGGCCTAGT GGACAATATA CTAATTAATA GCTAATACTA 001680 001681 ATAACTACTA CTATTTTTGA GTACTAACAC AGGCACTGTG TTAAGTGTTT TACAAGAATT ATCTCATTTA ATCTTCATTA 001760 001761 TAACCATATG ACATGAGAGC TATTATTATC CCATCTACAG ATACAACATA TAGTTTTTTC CTGATAAGCA CTTTAAGCAC 001840 001841 AGTTACAAAT ACAGATGCTT TGGACAGTGA TTTATAATGC TGGAAAGTGC CTTAAAGCTC ATCTTCCTCT TATAACTCAT 001920 001921 TTTTCCCTTG GAAGGCGATA CTGATTGATT ACATCTTTAC TTTTCCTACC TTCGGTATTG TGAGGATTAA ACATTACACA 002000 002001 AAAATAGGAC ATGCAATTCG TTCTGGATTT ATTTGACAAT GAAGGGGAGA ACGGTGGATC TTCTCAGCTG GGATTGAGCA 002080 002081 GGGATCTGAG CCAGCCTCAG AAGCTGGAAT CCTGCCCATA GGGTGGCCCT GTTTCACTTC CTTGCTAATG CCCAGGTGGG 002160 002161 CACAACGTGG CTCTACTCTT CAAAAGTTCT CTTAACACAG GAGAGGTCTC AAGCTAGCCC TAAACAAGCA ATAGGATTAG 002240 002241 ATCCTTGATG CTCATGGATA AACCATCCTG AGGACAATTT ACCTCATTGA TGAATTACTG TTGGGCAATT TATGAGTTGT 002320 002321 ACTATAATGT GAAAGTGAGG GAGAAGAAAG CCTCAATGTA CAGTAAACAC AGAATTTGGC AGAAAGGGAT CCATGTAGGA 002400 002401 AAAGAAGCCC GCGAATCTTA GTAGGTACAT GCTGGGCACA GCATGGGCAA TAACTTGAGG TCTGTAGAAG AAAAAATTGT 002480 002481 ATCACTGAGA TAAAGTAAAA GAAGAGAGAA AATGATGTGA ATGCACAAAG AGGGATTAAC ATTCGTTCCG CTTCAATACA 002560 002561 AAAGTATATT GTGCTTGTAT TGAAATATCA ATTTTGAACA ATACTTCATC TGCGCCCCAG GCTATTCGTA ATAAAGATGT 002640 002641 CCTCCTTGGA GCATAATGAA GAAGTCTCAG AAAGTTAGCA GTTAGAGGGA AGATGATAAT CAATCAGCCT TGACGCAATT 002720 002721 TGATCAAAAG TAATGAAAGA GATGGAGAGT AGGCGAGTGT TCTGAGCAGC AAACACTTAA GGAAAGAGCA TTCGTTTTTA 002800 002801 CTGGTGTAAC CTTTGGTATT TAATGCATTT ACAAATGAGA ATCTCATCTC TGCCTGCCAT TCTTCTTTGT TTAAATATTG 002880 002881 GTTGTTTATT AAACTCAATT CCTTAACAAA GTATTCAGTA TCTAGTCATG CTTTTATGTA AGAAAAGATT CTCCAAAAAA 002960 002961 GATATATTTT AGAAATTGAT TTCTGAACTT TAGGTTTCAC ACTATCATCC CTTTCAGGGC CAGAAAGCAA TTAGCTTTCT 003040 003041 GTCAAACTGG GAAGTTAATC TGGAATGTTT TCAGGATGCT CAAGTTCCTG CAAGCTTTAT ACCTAAAGCA GATTCGCAGC 003120 003121 TGTTCAGAGA ACAACCTTTG AAGTAATCAT GCTTTGCTAG CATCTCAGAT GTTTTGCTTT GATCTGCAGG TACCATTTTT 003200 003201 CCTAAAAAAA AACTTTCTTA TGATTGTTGT ATTTCTTGTC ACCAAACATT TAAGTTCTGC AATGTCCATA TTCCTGTAAA 003280 003281 CCAAGGTTGA CATATATGGG CAAATATTTT GCCAGTTGTG TTGTTTTTGG TAATATACAA GTAAGAGAAA CAATATCACT 003360 003361 GAAGCTGTGT TTTCTTTTAA ATTCTCATTA AAATTCATTT TGATTATATA GTAATTTTAT ATTTTCCTTT CATGTTCACA 003440 003441 TTCTGGAATT TGAATAAGAA AGATGAAGTC ATTTATCTGC AAACTTTATG CAAAATGAGA AAAAGAACAA ACAATTTCTT 003520 003521 AATGAGTTTT ATTCCTATCA TTGTTACAGC ATAGGTTTTA GGAAGTTTTG TATAAAAGTA TTTGATAACT AATATATGTT 003600 003601 TAACAATTAA TGAAATATTT ACTAATTATC TTGCATATGA AATGGTATTT ATAAAATGTG ATGGAGAAGG AAAAAAAGAA 003680 003681 AAGTGAAAAG GAAACAAGCA AGGAAGGGAG AAAAGGAAGA AACGCTAACA AGAGAAGATG GAAGTAAAAG AGAAAACAGC 003760 003761 TAAAGTCAGG AAAGAAAACA AAAAGAAAGA AGATCAAAGA AAAGGAGGGA GACAAAAAGA AAAAAAGGCA AAATTGAAGT 003840 003841 GATTATTTTC TACAAATCTC ATTGAGTTAT TGCTATTAAT ATATATTTCT GTATGTGTAT AAATGTATAT ATACACATAT 003920 003921 ATACATATAC TTCTTTAAAT AAATGTCTTT ATTTCCTGAG TAAAAAAAAA AAAAAAAAAA AAAAAAA |
Predicted Small Protein
Name | NONHSAT037087_smProtein_3431:3553 |
Length | 41 |
Molecular weight | 4869.8349 |
Aromaticity | 0.15 |
Instability index | 42.91 |
Isoelectric point | 9.86248779297 |
Runs | 9 |
Runs residual | 0.0469758064516 |
Runs probability | 0.0401185499226 |
Amino acid sequence | MFTFWNLNKKDEVIYLQTLCKMRKRTNNFLMSFIPIIVTA |
Secondary structure | LLEEELLLLLLEEEHHHHHHHHHHHHHLHHHHHEEEEELL |
PRMN | - |
PiMo | - |