NONHSAT037330

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT037330

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1044 nt

Genomic location

chr14-:64812191..64814329

Exon number

2

Exons

64812191..64813146,64814241..64814329

Genome context

Sequence
000001 AAATTCAGAA ACTTCAGAGA CAGCTCAGTG ATTTGAAATT GTCAAATAAA AATATGAAAA CTCAGCTGAC AAGAGTAAAT 000080
000081 GTCCTTAAAG ACAAAACAAT TGAAGAGCTC AGGCAATCTT TAGCAAATGT TGAAAGGATG AAAGAGAAGG CAAATGTTGA 000160
000161 AACGATGAAA GAGAAGGCAG TTGTGAAAAC AGAAAACTTG AAAACTACAT TAGACTCTGC AGAGCAAAAG GCAAGATCAG 000240
000241 ACAAAGAGAA GACCCAGCAG ATGTTAGATG CTGTCACTTC TGAGCCCCCA ACAGCAAAGA GCGCACCTGA AGAAGTATCA 000320
000321 GGACAAGAAC AAGAGGTTTT TTCAAAATAG TAAAATTAAA ATTAATTTAG TTGAAGTGAT AAACACCCAC GCCTACTTAG 000400
000401 ACTGTAACTA ACTTGACAAA AGGGAATATT GGCTTATGGA ATCATGAGTT AAACAACCTA ACCTCCAGGT GGGCGGAGAT 000480
000481 ACACCTGGGC CCCAGGATCA GCACCTGGAA CCTACAAGCC CTTTCTCATG GTCACTTCTT GGCATCTATG TGTCAGCTCA 000560
000561 TCTGTCTGAC TGCTGGTTGG TTTTCTCCAT GACAGGAAAC ATGATCACTG GCAACCATGG AGATTTATAT GGAGTTTCTG 000640
000641 TGACAGGAGA GAGAATCCCA AGAAAAGGTC TTATTGACCC AGTTTAGGTC AAGTGCTTAT CCCTGCTAAA CCCACAGTGG 000720
000721 CTAGGGATGG GATATATGAT TATTTTATAT ACTCTAACAA GTGACCAGGA GTGTAGAGTT CTATGACATC ATGTGTCATC 000800
000801 ATGTGAAGCT CAGGGGAAAC CATGTGTGTC ACTTTCTGTG TCACTGTCTA GGAGAATATA GTAGTGCTTC TTAACTTGCT 000880
000881 TAGATTTTCA CTATACTTAT AAAGCAAATA TTTCGAGAGA ATTTTTTAAA GGCCAACTGA TCATCTGGGG CAATTTTTAA 000960
000961 ATTATATGTC ACTTCTCCAT ATATTAGTTG CTTATGAAAC TTATACCTTA AGATATGCTT AAAACATAAA GTCATGATAT 001040
001041 TAGC
[back to top]

Predicted Small Protein

Name NONHSAT037330_smProtein_53:349
Length 99
Molecular weight 11065.4285
Aromaticity 0.0102040816327
Instability index 51.1602040816
Isoelectric point 6.36199951172
Runs 17
Runs residual 0.0344268548541
Runs probability 0.0364880451386
Amino acid sequence MKTQLTRVNVLKDKTIEELRQSLANVERMKEKANVETMKEKAVVKTENLKTTLDSAEQKA
RSDKEKTQQMLDAVTSEPPTAKSAPEEVSGQEQEVFSK
Secondary structure LLEEEEEEEELLLLHHHHHHHHHHHHHHHHHHHLHHHHHHLEEEEELLLEEELHHHHHHH
LLLHHHHHHHHHHHLLLLLLLLLLLLLLLLLEEEEEEL
PRMN -
PiMo -