NONHSAT039654
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT039654 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2638 nt |
Genomic location |
chr14+:100606001..100609024 |
Exon number |
2 |
Exons |
100606001..100606145,100606532..100609024 |
Genome context |
|
Sequence |
000001 CTCCCTGGCT GTGGGCAACA CTGGTCCTCA GTGTCACCAG ATGGTCCTCC TCTGTGCCCA TGACCCCTCA GCAGCCAAGG 000080
000081 CTGGCCCTGC CAGATAAATG TGTGTGCCCA TGATCACACC CAGGGGCACA GGCCACATAC GTTTCCCTCT GTACTCCAGC 000160 000161 CTGGTTGACA GAGTGAGACC CTGTCTCAAA TAAGTAAAAA TAAAATTCAA ATCGGTTACC TTAGTTTGGA AACTTTTCAA 000240 000241 AGAAGTAGTC CACGAGAACT ACCTTGAAAG AGCAAAACCA GCCAGGTGCA GGGGCTCACG CCCATAATCC CAGCACTCTG 000320 000321 GGAGGCCCAG GTGGGTGGAT CTCGTGAGGT CAGGAGTTCA AGACCAGCTT GGCCAACATG GTGAAACCCC ATCTCTGCTG 000400 000401 AAAATACAAA AGTTAGCTGA AAATACAAAA GTGGCACATG CCTGTAATGC CAGCTACTGG GGAGGCTGAG GTAGGAGAAT 000480 000481 TGCTTGAACC TGGGAGGCAG AGGTTGCAGT GAGCCAAGAT TGCGCCATTG CACTCCAATC TGGGGAACAA GAGCAAAACT 000560 000561 CTGTCTGAAA AAAAAAAAGC GACACCACAT GGGAGGATGT TTCTTGGGGG AGGTGTGCTA TGCCCGAGCA GGCTCCAGCA 000640 000641 CCAGGGGCGC TGGTGTGTCA GGAGCGCGCC TCCAGGCCGG TGTGAACTCT GCAACTTCAC ATTGTGCCTC CTGCCGCCGC 000720 000721 TGCTGCTTCC CCGAGCCCCA AGCTCAACCT GGAGCATGAG CTCCCACCCT GAGGAGGAGG CTGTCAATAC TGTGTTTCTT 000800 000801 TCCAGGGAGG CAACGGGTGG GTGCGATGTT GTCACTTAAG TTGCCACCTC TGCATAAGAG CTCTCTGATC AGAAAGCAGT 000880 000881 TTCTTTGTTG ACCCCAGCCA GCCTTGGCTC TCGGGTTGGG AAATACAGTC ACGGTATCCA TGGAGACCTC TTGAGGTGGA 000960 000961 GACGGGCGTT AAATCCTTCT CAGGCAGTCT GAGGTGGCCA GAGTCTGAAG CAAGCAGCCT CTATGGAGCG AGGGGAGCAG 001040 001041 GTGGGCCCAG CCTGAGCGGG GCCTCTGCAC AGCCAGCTTT CCCCCACACC TGTCTCCAGC CAGGGCACCC ACAGGCCCTT 001120 001121 TCTCTCCCAG GATGAAGCCT GCTGGGAGCG TGAATGACAT GGCCCTGGAT GCCTTCGACT TGGACCGGAT GAAGCAGGTG 001200 001201 AGCATGCCCT GTGCCCTTCC CTCAAGAGGC TGAGGGCAGC CAGCAGGCGG GGGACCGTCT CTGACCAGCA TGGCCAGGCA 001280 001281 GGCCCTGGGG GCCCACATGT AGCTGCCAAA AGGCCAGTCA GGGAGCAGCC ACGGCAGAAA GGGGGTGCCC AAGCCTGTCC 001360 001361 TTTGTCCCCA GCCCCTGCCA TCACCAGAAC TAGGATGTCC CTCAACCTTT CTGGGCACCT CCCTCAGGCC TGCCTCTGGG 001440 001441 GCTTTCTGCC CCGAGGAAGC CCTTAGTTTC AGTGGCGTCT ACCTGAGGGA GGTGGCAGCA GGATTTTCCC AGGCCTCCCA 001520 001521 TGCCGTCCCC CCTCAGCGTG GGAAGGGGGC CACGAGGAGA CAAGGGTGAC AGATGCAACT CTGGAGAGGC CCAGGAGACC 001600 001601 CCAAGCCCTT TGGACATGGC CCAGCCCAGG CCGGCTTTTC CGTCTCCACT GCCTGTCCCT TCACCTGGAC ACTCCTCTCC 001680 001681 CAACAGGAGA TCCTAGAGGA GGTGGTGAGA GAGCTCCACA AGGTGAAGGA GGAGATCATC GACGGTGAGT GCAGCCCCAC 001760 001761 CGGGGAGGGT GGCACCCAGG TGTGGCCGCA GGACAAGGGT CCCTGTCACC CAGGCTGGGG GCCTCCAGTT TTGAGCTGGA 001840 001841 GCCCATACTG CACTGGGCCC TGTGAGAGAT TTCATTCTTA CCATCTCTAG TTGAGGAAAC AGGCTCAGGA AAGCTGAAAG 001920 001921 CTAAGTGGCT TGCCTAAGAA TTTGTAGCTC CCTGGTAGCA TGACACCCGA ATCTGACCTT CCACATCCCC GGCACCTTCC 002000 002001 TGGAAGACCC ACGTGGGAAG AGCATGGAGG GGAGACCCCA GCATCGTTCC AGAGCCAGGT CTGGAGGAGC CACCTGAGCT 002080 002081 GCTGTCATTC CACCCCCTGG CGGTTTATAC TGCCTTCTTG ATACTGCCAC CTCCAGTCAC TGGTGTTGGG CTTCTGAGGT 002160 002161 GACCACTCTG CCTTCCTGGG GGTACAGGAA GACCAAGGTC TACAGAAGCA CCTTCCAGGC TTGAGCTCGT TCACAGCCTG 002240 002241 CCTGGCCCTG GGCTGGGGAA CAGGCAGGGA GCAGCCTCTG GCTCCAGAGC AGGGTGGGTC TCAATGCATC ACATCCGTCC 002320 002321 TTCCGGTTCC CAGCAGAGCC TTTGAATGCT CTGCCTCAGA TCTGCAGCCA GAGGAAAAGG GGGAGTGGGC AGGGCAGACT 002400 002401 CAGTCTAGGG ACGAGCTATG CAGCACAGCC AGTGCCAGCT CCCCACGTGC CTCCCCAACC AGGGTGATAA AGGCTGACAC 002480 002481 CTGGGTGTGT AGCTGGGTCT GGCCCCCAGG GCATCACAGT GACCGGGGCA AAAGGGTCCC ACAAGCGCAC AGGGGTGGAG 002560 002561 GCTGATGGCA GAGGGAAGAG GCAGGTGGGA GCCCAAAGAC CCAGGCCTCC TCCCCCAGCC GGCCCACCCT TGTTTGAG |
Predicted Small Protein
Name | NONHSAT039654_smProtein_596:838 |
Length | 81 |
Molecular weight | 8671.9695 |
Aromaticity | 0.0625 |
Instability index | 73.97125 |
Isoelectric point | 6.68988037109 |
Runs | 14 |
Runs residual | 0.0361842105263 |
Runs probability | 0.0448431624902 |
Amino acid sequence | MFLGGGVLCPSRLQHQGRWCVRSAPPGRCELCNFTLCLLPPLLLPRAPSSTWSMSSHPEE EAVNTVFLSREATGGCDVVT |
Secondary structure | LLLLLEEELLLLLLLLLEEEEEELLLLLEEEELLEEEELLLLLLLLLLLLLLLLLLLLHH HHEEEEEEEELLLLLLEELL |
PRMN | - |
PiMo | - |