NONHSAT039674
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT039674 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1286 nt |
Genomic location |
chr14-:100745186..100757347 |
Exon number |
2 |
Exons |
100745186..100746402,100757279..100757347 |
Genome context |
|
Sequence |
000001 ACAGCAGCCT tggccatgtg acctgggcag ttgcggatac atctgagagc ctgttttctc atctgcaaGA TTAAACTCCT 000080
000081 TACAGAAGTT AACTCTGCAG ACTGAGAAGA CGTGAACAGA GAGAGTCAAG GGGAGTGATG ACTATTTCAG AGACAGGAAA 000160 000161 GGACAGAAGA GATGACCAAA GGCACCCCCA AGGGATCAAG GCACAGAGGA AGAGGGACTT CATCCACACA GGAGCCTGGC 000240 000241 TCCTGCAGGC CATGGCATGG CTCTCGGGGC TGCCAGCAGG GCTCCCCATA GCATAGGTGT GCTCTGCGGT GGGCCCTTGG 000320 000321 GCAGGGTCCT GAGGACAGTG CCAGGGCCAG GCTCCAGTGC AGCACAATGT TGGGCAAAGG ACTCCTAACA CAGCCACGCT 000400 000401 GGGGCTACTC AACCCGACAG TGGGGAGGGA AGGTGTGGGT GCTCACAAGG CAGGCATCCA TAGAAGACGC TGCCCAGGTC 000480 000481 CAAGTCAAAG AACTACACGT TCTCATCCGA GCCCTCGGCA CTGAAGACCT CCACCATGGG CTGACCTCTC TCCTGACTGC 000560 000561 CAGATACAGC AAAGCCTGGC TTACCCAGAA AACAGCTGGG GTCTTCTGCT TAACTCAGTT CCATCAAACT ACCCAAGGGG 000640 000641 TAACAGATTC TGGATGAATT TTTTAAAGGG TCTCAagtta aatgtttcat tcatgattca caaaaggcac ttcaaaattc 000720 000721 cacagagcca cagggtcact gttagtaggt caccaatcct cctgtacagg accgatggag aagCTCTAAG ACAATGGGCT 000800 000801 ATGTGTTTCA CCTGATGGGG TCCCTGGCCA TTTGTAAATA AATCTCGGAT ATTAGCTAGT TTGTCATTTA TCTTGCAGTC 000880 000881 AAGCATACAC AAAACAGAAA GACACACAGT ATGTTTGCAC TTTGAATAAA TGAGATTTTG CTGTATCATG GCAGTTTATA 000960 000961 AAGTATTCTC AAGTCTGTTA TTTGACCTAA GATCCAACAT TATAATCGTA CATTTAAGAG GTTACAATGT GAGAGGTACT 001040 001041 CATTGAGCAG AATTTTCTAA TAATCTAATC ACCTTGCCGA TTTGCACCCA GTGTCCATTT AGAAACATGA AATTAAGCTA 001120 001121 CTGGCACTCA ATTGCCACAT TGCTAGCATT TAATAAGGAC TCCACTAGAT GGAGGAACAA GGGCTCTCAA ACCAAATAAC 001200 001201 CAACGACCAC AAGCATTTCC TGTCAGACAA GCCAAGGTCC TGCTGGAGCT GCCTCTGAAG GCAGCCGGCT GATGGACAGG 001280 001281 CCTGGT |
Predicted Small Protein
Name | NONHSAT039674_smProtein_653:814 |
Length | 54 |
Molecular weight | 6304.4462 |
Aromaticity | 0.11320754717 |
Instability index | 44.2018867925 |
Isoelectric point | 11.0051879883 |
Runs | 11 |
Runs residual | 0.047284859641 |
Runs probability | 0.0379390085273 |
Amino acid sequence | MNFLKGLKLNVSFMIHKRHFKIPQSHRVTVSRSPILLYRTDGEALRQWAMCFT |
Secondary structure | LLHHHLLLEEEEEEEELLLLLLLLLLEEEEELLLEEEEELLHHHHHHHHHHLL |
PRMN | - |
PiMo | - |