NONHSAT039873
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT039873 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1858 nt |
Genomic location |
chr14+:101426540..101429203 |
Exon number |
2 |
Exons |
101426540..101426556,101427363..101429203 |
Genome context |
|
Sequence |
000001 aaAAAGAAAA AACCAATggt tccaatagtt tcccaaatca tgctgatgct gcctcctgag aaatattttc agaatcactg 000080
000081 AGAAAAATGT ATGAAATAGT TAATGTCCTT GCTCTGTGTC AGTGGTAAGT TCCAGTTTGT TTATTTTATT GAGAAAAAGA 000160 000161 AGGtaattaa ttaattaagc aattaatatt tatttattta tatttgagat ggagtctcac tctgtttgtt gcccaggcag 000240 000241 gagtacagtg acgcgatctc agctcactga aacctccacc tcccaggttc aagcaattct cctgcctctg cctcccgagt 000320 000321 agctgggatc acaggcgtgt gccaccacgc ctggctaatt tttgtatttt tagtagagac ggggtttcac catgttggcc 000400 000401 agcctggtcc tgaactcctg acctcaagtg atccgcccac ctcagcctcc caaaatgctg caattacagg catgagccac 000480 000481 tgcaccccac ccaattaata tttaaaaGTC TAAGTAAATG AAAGGGGAAC AACATGGCTC AATGGAGAAA TGTCTAATTT 000560 000561 ATATAACATC ATTGTTATAT TGTACAAAAT GGATGCACCT TAGGTGAGTT AAGCATTCTG AAAAGACCAG GCTTTCTAGG 000640 000641 ATACTGCTAC ATTTTAGGAG ATTAGAAATC AGTGGAATTG GCACAGTCTT TGTCCGTTGA GTGGGTTTTC ATGGGTGTTC 000720 000721 ATTGTACATC TTTAAAATGA GTGAATGACT ACATACATGA ATAAAATCAA ACAAGGACAA GCCTATACTA ACGATGAAGA 000800 000801 ACCAAAATTT AGGATTAATT TGATTTAGTG TTATTTAGGA TGGTTTTTAA AAAAGATCAA GTCCCTATCA CAAATTGCTC 000880 000881 TGTTTAGAAT TCTACTGCAG GTTTTCCCTA AGCATTCCTC AAGTGATAAA GATGTAAGTT ACGAAGAAGG GACACATAGG 000960 000961 AACTAGAAGC ACTTGTCAGC GTTTTCTTCT GGTGGTTGAG TCGTGTTTAT GTAGAAAGAA TATACAAATT ATGTGAAAAA 001040 001041 AGGCTAAGGA AGGACCAACG ATGCGAGTGG AATACATTCT GAAATGTGTT TTATGATCAA AATATCTGTG ACCTACTGCG 001120 001121 GTCCACTACA AAGAGGGATT TAAGTGTTTA TATCTGTAGG AATGCCTACA GATAGATTTC AGTGATATTC AGGAATCAGG 001200 001201 TTCTCAGTCT TTGGTGCTTC ATGGATTTTG ATTTTGTTGT TATTCAATAA GTGAAAGAAT AAATAAATAT GTCAGTGTAT 001280 001281 AAAAATGAAT AGAATGAAGT TATCTAACTA TGAAAGTATG GGGTGAGGCA AGAATTATTA TTAATATAAC ATAGAACCAC 001360 001361 TGGAGTTCAG TAAGTAATGC TATCTTTACC CCAAAATGTA ACCCCTTAAT GCATCAAAGG GGTTACATTT TGGGGTAAGG 001440 001441 ATAAGTAAGC AAGATTGTGA TGTATGTTCT TGCTTTGAGT CAGTGATGAG TTCAAGTGGC CACTTACTGC AGAGGGAAAA 001520 001521 AAATAAATTA TGCCATAAAA TAATAAATAC CTAAATGACT GAGCAAAGGA AATGGGGAAG GCATGTATCA GTGGAAAGAA 001600 001601 TATCTCAGCT TTCTGTTATT TGCTGTGCTT ATATTCCTCA GAATGAAAGC TCCTAGGTGA TTTAAGCATT CTACTGTGGC 001680 001681 CATGAACTCT TATGTGTTAG GAGCATAGAA ACCAATGTAA GAGTCAAAGC ACGTGTCTTA GTATGAGTGG CTTGTTTAAA 001760 001761 AATATTCACT GTACTGTTTA CAAAATGTTT AGTCAAAGAA GTTGACTATG GTGTACTATG GCATTGATAT GAAATGTATG 001840 001841 TTAATTAGTG GATATATA |
Predicted Small Protein
Name | NONHSAT039873_smProtein_1571:1645 |
Length | 25 |
Molecular weight | 2602.077 |
Aromaticity | 0.125 |
Instability index | 63.2 |
Isoelectric point | 7.70721435547 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0100865571454 |
Amino acid sequence | MGKACISGKNISAFCYLLCLYSSE |
Secondary structure | LLLEEELLLHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |