NONHSAT040214
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040214 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
946 nt |
Genomic location |
chr14-:104208329..104213734 |
Exon number |
3 |
Exons |
104208329..104208628,104212710..104212890,104213270..104213734 |
Genome context |
|
Sequence |
000001 ATTCCACCTA CACTTCAAGG GATCGCCTTG AAGAAGTCAG TATTTTTGCA GAGATGCGTC TCCACCCAAA GGTCCTAGGT 000080
000081 ACCTTTGAGC AATTGTGAAA GCCATAACCC CTCACCCCGA AATGACCTGT CCTCATGCAT ATAGAATCTT ACAATCACAG 000160 000161 GGGTTATGGA TCCTATTTAG AGCCTATATT GAAATCTTGA GGACGTCAGT AGTTCTCTAG AATCCCTGTT CCAGGCGCCT 000240 000241 CTGTTCCTGA GCAGTGTTAT GTGAACAGTG TCCTCTGTCT GTGGCTCTGT GTCCTGGCTG AGAAAGGCAG CGCTGCCTTC 000320 000321 AGGGAACTGG GCCCATTGCT GGGAGTCAGA GCCTTACGTG CTCACTGTGC CCCACGTGGC TTAGACAGTA CCGGCTACAG 000400 000401 CCCttatccc gactccacgg gtgtgagcac agaggctgag tcacctgccc gaagcagcac agcgaCTGAA CCGTGTGAAT 000480 000481 GGCACGTCAT CACCACAGTC CCCTCTGAGC ACATCGGGCA GGGTCGCTGC TGTGGGGCCT TATATCCAGG TTCCCAGTGC 000560 000561 CGGAAGCTTT CCTGTGCTGG GGGACCCTAT AAAGCCCCAG TCTCTCAGTA TTGCCTCAAA TGCTGCTCAT GGAAGATCCA 000640 000641 AATCCGGGCA TCGAGATTGG TAAAGTGCCA CCTCCCATCC CGGGTGTAGG CAAGCAGCTG CCTCCAAGCT ATGGGACATA 000720 000721 CCCAAGTCCT ACACCTCTGG GTCCTGGGTC GACAAGCTCC CTGGAAAGGA GGAAGGAAGG CAGCTTGCCC AGGCCCAGTG 000800 000801 CAGGCCTGCC AAGTCGACAG AGGCCCACCC TGCTGCCCGC CACAGGCAGC ACCCCCCAGC CAGGCTCCTC ACAACAGATT 000880 000881 CAGCAGAGGA TTTCCGTACC GCCAAGTCCC ACGTACCCGC CAGCGGGACC ACCTGCATTT CCAGCT |
Predicted Small Protein
Name | NONHSAT040214_smProtein_134:199 |
Length | 22 |
Molecular weight | 2494.7782 |
Aromaticity | 0.142857142857 |
Instability index | 89.9904761905 |
Isoelectric point | 6.69671630859 |
Runs | 5 |
Runs residual | 0.00816326530612 |
Runs probability | 0.0279809220986 |
Amino acid sequence | MHIESYNHRGYGSYLEPILKS |
Secondary structure | LEEELLLLLLLLLLLHHHHLL |
PRMN | - |
PiMo | - |