NONHSAT042113
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT042113 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
603 nt |
Genomic location |
chr15-:44028996..44038483 |
Exon number |
4 |
Exons |
44028996..44029206,44036593..44036766,44037220..44037365,44038412..44038483 |
Genome context |
|
Sequence |
000001 cggcgagtgt ctgggcgagc gtggctgggc ccggtcctgg gctgggggca ggggctaggg ccgggtcccg ggACATGGCC 000080
000081 GCTTACCAAC AAGAAGGGCA GATGCAGCTT CCCCGAGCTG ATGCCATTCG TTCACGTCTC ATCGATACTT TCTCTCTCAT 000160 000161 CGAGCATTTG CAAGGCTTGA GCCAAGCTGT GCTGCGACAC ACTATCAGGA GTTACTTGAT CCTTCCCGCC AGAAGAAACT 000240 000241 TATGTTGGGA GATCAACACC AGCTAGTGGG CGTCTCTATA AAGCCTCAAC GTATAGAACA GATTTCACAT GCCCAGAGGC 000320 000321 TGTTGAGCAG GCTTCATGTG CGCTGCAGTC AGAGGCCACC TCTTTCTTTG TGGGCCGGAT GGGTCCTTGA GTAATTGCTG 000400 000401 GAATCCACAA ATACCAAACT ATGGCCATTG AAGCTGACCT TGGAGGGGGC AGCTTGGTTT ATCTTGCTTA TTTTCATCCT 000480 000481 GGAGATCCTT CTTAAGTGGC TATCCAACTT TTCTGTTTTC TGGAAGAGTG CCTGGAATGT CTTTGACTTT GTTGTTACCA 000560 000561 TGTTGGTAAG GATAGAGATC CTGAGGGTTC GTTTAGTGGG ATG |
Predicted Small Protein
Name | NONHSAT042113_smProtein_74:265 |
Length | 64 |
Molecular weight | 7295.3496 |
Aromaticity | 0.0634920634921 |
Instability index | 78.426984127 |
Isoelectric point | 9.29437255859 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.0376258611552 |
Amino acid sequence | MAAYQQEGQMQLPRADAIRSRLIDTFSLIEHLQGLSQAVLRHTIRSYLILPARRNLCWEI NTS |
Secondary structure | LLHHHHHHLLLLLLHHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHH LLL |
PRMN | - |
PiMo | - |