NONHSAT042187
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT042187 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
472 nt |
Genomic location |
chr15+:45007924..45009137 |
Exon number |
2 |
Exons |
45007924..45008075,45008818..45009137 |
Genome context |
|
Sequence |
000001 CTGCTGAAAG TTGTGTATGA GTAGTCATAT CATAAAGCTG CTTTGATATA AAAAAGgtct atggccatac taccctgaat 000080
000081 gagtcccatc ccatctgatA TAAACAATCT GCATATTGGG ATTGTCAGGG AATGTTCTTA AAGATCAGAT TAGTGGTTAC 000160 000161 CCACATTACC TGCAAGGCTT TGATCTTTCT TCTGCCATTT CCACATTGGA CATCTCTGCT GAGGAGAGAA AATGAACCAC 000240 000241 TCTTTTCCTT TGTATAATGT TGTTTTATTC TTCAGACAGA AGAGAGGAGT TATACAGCTC TGCAGACATC CCATTCCTGT 000320 000321 ATGGGGactg tgtttgcctc ttagaggttc ccaggccact agaggagata aagggaaaca gattgttata acttgatata 000400 000401 atgatactat aatagatgta actacaagga gctccagaag caagagagag ggaggaactt ggactTCTCT GC |
Predicted Small Protein
Name | NONHSAT042187_smProtein_131:256 |
Length | 42 |
Molecular weight | 4927.9604 |
Aromaticity | 0.146341463415 |
Instability index | 47.3512195122 |
Isoelectric point | 10.0443725586 |
Runs | 6 |
Runs residual | 0.0296274128385 |
Runs probability | 0.0845109815697 |
Amino acid sequence | MFLKIRLVVTHITCKALIFLLPFPHWTSLLRRENEPLFSFV |
Secondary structure | LEEEEEEEEEHHHHHHHHHHLLLLLLHHHHHHLLLLLLLLL |
PRMN | LLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooo |