NONHSAT042330
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT042330 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
576 nt |
Genomic location |
chr15-:48454892..48462107 |
Exon number |
5 |
Exons |
48454892..48455090,48458130..48458223,48458318..48458325,48460828..48461036,48462042..48462107 |
Genome context |
|
Sequence |
000001 ATTAAAAATC AGGTTTggcc aggcgtggtg gctcacgcct gtaatcccag cactttggga ggcgagGGAG AATGATGAAT 000080
000081 CAGCAAAAGA AGAGAAATCT GACTTAAAGG AAAAATCTAC AGGAAGTAAG AAGGCCAATA GATTTCATCC TTATTCAAAA 000160 000161 GACAAGAATT CGGGCGCTGG AGAAAAGAAG GGTCCAAATC GTAACAGAGT TTTCATTAGC AACATCCCAT ATGACATGAA 000240 000241 ATGGCAAGCT ATTAAAGATC TAATGAGAGA GAAAGGGTTG TGGTGTGGTT GAATTCAAAG ATGAAGAATT TGTAAAGAAA 000320 000321 GCCCTAGAAA CTATGAACAA ATATGATCTT AGTGGAAGAC CCCTTAATAT TAAAGAGgga ggcctgaggc gacggagaga 000400 000401 gatggggagc ggctggtcgg tggagcagtc agaacattta ttgattaagt tcgctgtttt atttgggcac ggttgatggt 000480 000481 gccccaaaac aattaaaaca tcaaagatca ctgatcacag atcaccataa cagataataa tgaagaaggt tgagatattg 000560 000561 catgaattac caaaat |
Predicted Small Protein
Name | NONHSAT042330_smProtein_332:475 |
Length | 48 |
Molecular weight | 5371.124 |
Aromaticity | 0.0851063829787 |
Instability index | 89.3425531915 |
Isoelectric point | 9.98004150391 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0274938804351 |
Amino acid sequence | MNKYDLSGRPLNIKEGGLRRRREMGSGWSVEQSEHLLIKFAVLFGHG |
Secondary structure | LLLLLLLLLLLLLLLLLLEEELLLLLLLLHHHLHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |