NONHSAT042384
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT042384 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
569 nt |
Genomic location |
chr15-:49906989..49913013 |
Exon number |
2 |
Exons |
49906989..49907440,49912897..49913013 |
Genome context |
|
Sequence |
000001 GTTCGTCCGG GACCCGCCTC AAGCCTCGCA GCCTTTCACC CAGTTTCCTC CCGATTCTTG CTGGGACAAC AAAATTGGGA 000080
000081 AGCGGTTCTC GAAACATACT GTCAAGGCGT AGTTGCATTT GGTCGCCCAA CTCACATTGA AGCCTAAGAC CCAGCTGATT 000160 000161 TCTCTTCATT TCTGCAAAGT TACTGTACCA TGGCAGGCCA ACGAACATGT CAAAGGAGGA GCAGCAGAGC TGGCCCCGGG 000240 000241 GTAAGGAAGC TTCCACAGCT TTATGTTCAC TTACAAAGGT TATATTTCTC TTGGAATTTC AGGTAATCAG GGCTCCCAGG 000320 000321 TAGAGCTGGC TTtgtcactg aaacaccaag ggtttggtct aggtcttaat gctcgctgca cagatggcca atcactgaga 000400 000401 tgagtattgc caaggaagaa agctttaata gggtgctgca gccgaggaga tgggagatca gtctcaaatc catctccctg 000480 000481 actgactaaa attagggttt tatatagcaa ggaagaaatg taaccatgtg tgggaaaaca gaaattaggg agtggtggta 000560 000561 agaaggagg |
Predicted Small Protein
Name | NONHSAT042384_smProtein_206:322 |
Length | 39 |
Molecular weight | 4379.0693 |
Aromaticity | 0.0789473684211 |
Instability index | 43.9921052632 |
Isoelectric point | 9.18402099609 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0325472531354 |
Amino acid sequence | MSKEEQQSWPRGKEASTALCSLTKVIFLLEFQVIRAPR |
Secondary structure | LLHHHLLLLLLLHHHHHHHHHHHHHHHHHHHEEEELLL |
PRMN | - |
PiMo | - |