NONHSAT047051
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047051 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1338 nt |
Genomic location |
chr15-:72114640..72115963 |
Exon number |
1 |
Exons |
72114640..72115963 |
Genome context |
|
Sequence |
000001 AAATTGAAGC AAATCAACAG CAAATACAGC AGGATTCAGG GAGGCTTAGT TTACAACGTA CTTTGTACCT CCTGCCATTT 000080
000081 AAATTATTTT GCCACTCTGG GCTTCTGAAA ACACAAAGGG AGATACAGCC CTCCAACTAT GAGCCTTGCA GAGAGAGACA 000160 000161 AAAGGGCCAG AGGTCCTGGG ATGGAATACT AGAGCCCCCA CCTTCTCATG CTTTGGAAAC CTGCCAGAGC ACTTACCCTG 000240 000241 CTGGAAGATT AATGAAGACT CCATTCTGTG TTTCATAACA GTAGCGTTGT TTTCTCCATC AAAAACAGAG GGTCACAGAA 000320 000321 ATGTGCTGAA AAGATGTGGT CCAGCAAGGT TCTGTAGTCC CACCTCAGTG CCTGTGGGCT GTGTTTTTCA CTGTAACAAG 000400 000401 CACTTTGGTA AACTAGAAAG AAGAAAGGAT TCTCAGGATG TGTTCAAAGC TAAGAGAGTT TTCATTTTAA AAAGAAACAT 000480 000481 ACATACTCAC TCCATGGCTT TCCTCATCCT CCTCTCTTTT TTCTTCTTGG TGGGAAGCTG GATGCGGGGC ATGCATCATT 000560 000561 CTGTATGGAC AAATGTGTTA TGTCCACCCA TACTCTTGTG ACAACTCCCC AGCACTGTCC TGCAATACCA TGCTGGCCTT 000640 000641 GGTAGTAAAA CTCCTTGGTA TCTGTGAGAG TCCTCTTTTT CTATGCCCTA GACTACTTTT AACCACTTTT CTCTGGAATG 000720 000721 ACTCCCACAT TTGATTGGGT ATTGAAAGGG TAACAGCAAA ATGATGATTG TGGAGATGGA TCTATTAGGT CTCATGTTGG 000800 000801 TCCCCTGGTT GAAACTATTT TCAAAAAAGC CCCAACAATG GGCCTGTCAC CTTGCTAGTC ATCCATTCTT AATGCCTATT 000880 000881 TATCAGCCCT CTGAGGTCAT ATAAAAGTTG CACCTTTTGA ACCAAGTATT TGTATTTACT ATGGGAAAGG TGTGGACTAC 000960 000961 AGATTCGTAT TATATTATTT TAATGGATTT TAAGTAATTT ATAAGTATGC TGAGTGTAAA TTTTTTTTAA AAACTGTATT 001040 001041 ATAAAAGGAC ATATCCTGTG AAATATAACA TTTTACTGTT TAATAGAATA ATTCTATAAG AAGAATGATT TATCTCACCC 001120 001121 ACGGAACTGA TTACATTCCG GATGCAATCA ATAGGCACTT TGTAATTTCC TTTTTGTTTT TTTTCTTTGC TGGGGGGTTG 001200 001201 AGGGGTAACA AGATACCATC TGTATAAAGT GCAGTTTGTG TCACTCAAAA TATGCACTGT ATGGCTACAC AAAAGCAGCT 001280 001281 TGATGAACAA ATCACCCCAT GGCTCATTAA AGAACAAAGC TTCAAAAAAA AAAAAAAA |
Predicted Small Protein
Name | NONHSAT047051_smProtein_572:733 |
Length | 54 |
Molecular weight | 5958.0668 |
Aromaticity | 0.0943396226415 |
Instability index | 66.9641509434 |
Isoelectric point | 5.95513916016 |
Runs | 7 |
Runs residual | 0.0281868384722 |
Runs probability | 0.0725515431398 |
Amino acid sequence | MCYVHPYSCDNSPALSCNTMLALVVKLLGICESPLFLCPRLLLTTFLWNDSHI |
Secondary structure | LEEELLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLHHHHHHHHHLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | oooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiii |