NONHSAT047070

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT047070

Source

NONCODE4.0

Same with

,

Classification

sense

Length

564 nt

Genomic location

chr15-:72454249..72456209

Exon number

4

Exons

72454249..72454353,72454614..72454718,72455607..72455704,72455954..72456209

Genome context

Sequence
000001 ATCTATATTT GGTAATATCT GGAGAAAACT CTGATAAACC TGGTGTGGGC TCCTTAGGGC AAGTGAGATC GCAAGGGCCA 000080
000081 TGGTAAGATA GCTTCTCCTG TCTTACTGCA GGAAGTCCTC ATCCCTGAGA TGAAGTGGAG AAAGGTATGC CCTTCCTCCA 000160
000161 GGTCCCTGTC TCTCCCAGAC AACATCCCTT GTATCCCTCC ATCATCCGTG GACTCCACAG ACAGTTTCTT CCCCTCCAGG 000240
000241 AAGCCTCCAA TGTCTGAATG CTGTCTATGA GGAGGATGAG CTGGAGGAGG AGCCCAGGAG CACTGGGGAG CTGAGGCTCT 000320
000321 GGGATTACCG GCTCCTCAAG GTCTTCTTTG TGCTGATCTG CTTCCTGGTC ATGTCCTCAT CCTACCTGGC GTTCCGTATT 000400
000401 TCTCGGCTAG AGCAGCAGTT ATGCTCCTTG AGTTGGGATG ACCCAGTCCC TGGGCACAGG TAACAGCCAC TTGGCCTTTG 000480
000481 TCCCCATTCC TTCTCCAAGA AGAATGTTCT GGGTGCTAAG TCTCCACCAA TGATCCCTGT GGTTTATGCT GCTGCTGTGC 000560
000561 TAAG
[back to top]

Predicted Small Protein

Name NONHSAT047070_smProtein_146:256
Length 37
Molecular weight 4166.8497
Aromaticity 0.0833333333333
Instability index 89.0305555556
Isoelectric point 10.7367553711
Runs 5
Runs residual 0.0415695415695
Runs probability 0.0342165695107
Amino acid sequence MPFLQVPVSPRQHPLYPSIIRGLHRQFLPLQEASNV
Secondary structure LLEELLLLLLLLLLLLHHHHHHHHHHLLLLLLLLLL
PRMN -
PiMo -