NONHSAT047616
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047616 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1209 nt |
Genomic location |
chr15+:79165315..79185360 |
Exon number |
7 |
Exons |
79165315..79165399,79170555..79170601,79172854..79172921,79178483..79178569,79183331..79183356,79183826..79183914,79184554..79185360 |
Genome context |
|
Sequence |
000001 AGTCGGGGGT GGTGGGAGAA GGAGGAGGCG GCGAATCACT TATAAATGGC GCCGAAGCAG GACCCGAAGC CTAAATTCCA 000080
000081 GGAGGGTGAG CGAGTGCTGT GCTTTCATGG GCCTCTTCTT TATGAAGCAA AGTGTGTAAA GGTTGCCATA AAGGACAAAC 000160 000161 AAGTGAAATA CTTCATACAT TACAGTGGTT GGAATAAAAA TTGGGATGAA TGGGTTCCGG AGAGCAGAGT ACTCAAATAC 000240 000241 GTGGACACCA ATTTGCAGAA ACAGCGAGAA CTTCAAAAAG CCAATCAGAA AACGAAAAAG AACAAACAGA AAACACCTGG 000320 000321 AAATGGAGAT GGTGGCAGTA CCAGTGAGAC CCCTCAGCCT CCTCGGAAGA AAAGGGCCCG GGTAGATCCT ACTGTTGAAA 000400 000401 ATGAGGAAAC ATTCATGAAC AGAGTTGAAG TTAAAGTAAA GATTCCTGAA GAGCTAAAAC CGTGGCTTGT TGATGACTGG 000480 000481 GACTTAATTA CCAGGCAAAA ACAGGTAACT TGAAAAGCTA CCCAGATTGT TAAGCTATAT GATACATTCT TGCTAGCAAA 000560 000561 AAAAGTTTTT AAAGGAAAAT GTTATATTGA CTTGAATTAT TAAGGTATGA CTGataaaat aatattttaa tttaGAGGCT 000640 000641 GAACACTTTA GAACTACTAC CAGAAAGAGT AAGTTAGAAG AATAAAAGTT CACATATAAA TTTTATGAGG TTATAATGAT 000720 000721 AAAGGTGGAA ATAACTCATT TTTGGAGATT GCTAGGGCAG GAACTCGTTC TGAAAATTCA TAAAGGTGAA GAAGCATATG 000800 000801 TCTTACTGTC ATTGCTAATG GTAGGCCATA gaaagcacac accaccacct gcaaggtatt catgaccctg aaaagaacct 000880 000881 gaatcttact aagcgcctgg atctattgtt agtttgcagg aaataggatg tttaatggag tgacatgttt gtcaatcgtt 000960 000961 gaactctata attgagaatt ttataggaca aatgaagcta tttgaacaaa tggcataggt agggttaggg atagttgggg 001040 001041 gagatgatta gggactgctt gaggattatg agacttaaga gacctatcag tcatatacag tatgtggata tagtttgaat 001120 001121 tctgatttga aTCCTTTGGA GGGTTATGCA GTTACagcta aactgcgaag attcaagcat ggctgtatca cttattattt 001200 001201 gtgagtttg |
Predicted Small Protein
Name | NONHSAT047616_smProtein_209:346 |
Length | 46 |
Molecular weight | 5461.7781 |
Aromaticity | 0.133333333333 |
Instability index | 49.62 |
Isoelectric point | 6.54681396484 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.0329888712241 |
Amino acid sequence | MGSGEQSTQIRGHQFAETARTSKSQSENEKEQTENTWKWRWWQYQ |
Secondary structure | LLLLLLLLEELLLEEHHHHLLLLLLLLLHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |