NONHSAT048403
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048403 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
543 nt |
Genomic location |
chr15+:91141106..91147636 |
Exon number |
4 |
Exons |
91141106..91141443,91143540..91143673,91145567..91145617,91147617..91147636 |
Genome context |
|
Sequence |
000001 atatcctccc ttacagtttc actttaagat gtcttctaGT GGGACATAGT TAGAGGTAAA GGGACAAAAA GAAGTAGAAT 000080
000081 GACAATAAAC ACATGGCTGA GCAATCAGGA AGGAGCCAAA TTGTGGCCAG TTTTATATAT TAAATCTGAC CCTGAAACTT 000160 000161 GTCTTGGTAG GTGGGTTCTG TTAACCAGAC TCCGAGCCCA CTTACCCCAC CAGCTACATG GAAGGTCTCA GGCCTGCCCC 000240 000241 ACAAACTGTG TCCCTGGCAG AACACAGAGT TCCAGAGCAG GAGAGAAATG ACTGGCTTCC AGGCTGCCCC GACAAGGCAG 000320 000321 TTCCTGAGCC CTGCCCAGAT TCTGTATTTA TTTGAGCTGC CCAGCCCAGG CCTGCAGGAT AGGGCCCCAC TCCATCAAGG 000400 000401 CTCCTGTTTC CTCCTGAGCC CGAGCAGATG GTACCTTCTC TTATAGCCTC CATCCTTCCC AGAACACTCC AGTGCTTTTG 000480 000481 GAGCCAATTA TTCCTCACAG CCTCTGGATG AGAGTTGGCC AAGGCAGCAG CCTCCTTGGA AAG |
Predicted Small Protein
Name | NONHSAT048403_smProtein_287:445 |
Length | 53 |
Molecular weight | 5877.7917 |
Aromaticity | 0.134615384615 |
Instability index | 90.6634615385 |
Isoelectric point | 7.97723388672 |
Runs | 7 |
Runs residual | 0.0157540199913 |
Runs probability | 0.0347237994296 |
Amino acid sequence | MTGFQAAPTRQFLSPAQILYLFELPSPGLQDRAPLHQGSCFLLSPSRWYLLL |
Secondary structure | LLLLLLLLLLLLLLHHHHHHHHHLLLLLLLLLLLLLLLLEEEELLLEEEELL |
PRMN | - |
PiMo | - |