NONHSAT049670
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT049670 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1593 nt |
Genomic location |
chr15+:93425937..93441975 |
Exon number |
5 |
Exons |
93425937..93426416,93428745..93428814,93429399..93429484,93435234..93435302,93440954..93441975 |
Genome context |
|
Sequence |
000001 ATGGCCGGAG AGGCAGCAGC ACCCCGAGCT GTCAGGCGTT CCGCCGCGGC CGCGAGGCCC GCCGGCCGGC GGGGAGCTAC 000080
000081 GCCCGGACGG CCAGCAGGCC CGCGGGAGTG GGGCTGCCGC GGCTGAGGCG AGGCGGGCCG CGCGCGTCGG CGTCACAGCC 000160 000161 CGCGGCAGAG GCGCCCAGGG CGGCCGGGCC CACGACGCCG AAAGCGCCGC TGCGGTTGCC GCCTCGGAGG CTCCCCCGGG 000240 000241 CCCCGGCGGC TGGACCCGGC GCGGGCGGGA GGCTCGGGCG GGCGGTCCGG CCCGGGACTC GGGTTTGGGC GACCAGGAGG 000320 000321 TGCCGGTGGC CGCGCTCGGA CCCGGTGACT TAAGAGATTA AAATTAATTT GGTTGCTGTT GGTTCTGAAC AAATAATGAG 000400 000401 TTCTTTTATT TGAGGTATGC CATTTTGAAG ACTGAGACGT TGGAGTTTTA TCCTAGAGGA TAAAGGAAAT CTTTGGGAAA 000480 000481 GTCAGTATTT TATATAGCAA AAATATGAAC CTCAAACTGA ATCCTCTAAA GGCCCCATAC AATGAAGTAG ACATTGGTGG 000560 000561 AAACATTTAC ACCCAGTCAG CTTGAAGAGT TTCAAATGGA CCCTACCACT GAGAAATCAA GATGGCAGTC TACTATGGGG 000640 000641 AATTGAGGAA AAATGGATTA ATACAAGAGT CCTGTGATAA TATACAACCA AGACAGGGTT CTTTTAACAT GGATTCCATG 000720 000721 CAGTGAATGA AGACATAGGT TTCTTACCCA ACACAAATGG ACAGTGGATT TGACTTTCTA AAGACTTTTT TTGTGGACAT 000800 000801 TTTGACATTT GGAGAAGAAA GATGGCACAC TAACCCAGAT AATAGTTTTT ATGCCTGGAA TTTTTTGCAG TTTGATTTGT 000880 000881 ATGCGTATGA CCTCTTGAAA TGTTAATTTT TAATAAAATT TGTAACACTT AAAAATTTCT CAGTTTGGGT TTTTTTTTTT 000960 000961 AAGTGGAAGT TTAATTAAAT GTTTAGTTTT ATTTTAGTAA TACTTTGGCC TTTGTAGTTG CCGAGTGGTA AAGTGTACTG 001040 001041 AATATGAATA AAGCTGGTAA ATTGGAAATG GTGTAATCGA AAACATTTTA CTTGGTTTAT GAAGATTTAC GTTTTTCACA 001120 001121 AAGTTGTGCT CTTAGATGGT CATTTGGTTT AAATACTGTT TTGTTTGTGC TTTCATGAAA CACCTTTCAA AACAACTCAA 001200 001201 TGGGTAATAA TAGAATCTGA TTTTAATCTG CCACAAGATT TTAATGAACT TGAAACAAAC TGCTTGTTGC TCGAAAATTC 001280 001281 AGGATGAGTG ATACACATAT ACTTCTGAAT TATTTTGTGT TGATTGAAAT GGTTTCTTAA GCTTTTTAAT ACTATAAATA 001360 001361 CATCTTGCTA TAGAATATTC ATCTGAATAT TTAAATTAAT GTCTCCTATT GTCTTACTAT TAGAGGAAGA AGTGTTGGAT 001440 001441 TTATGGGTTA GGGTCCTTGG AGTATTCACA ATTTTTTAAA TTTGAAATTA TGTGTGTAAT CCATTTTATA TAACTTTGAA 001520 001521 GTAGGATTAA TATCTTGTAT CGTCTTTATT TTGTACAATT GGGGATTTAG AATAAATGAA TTGCACCCTG CCA |
Predicted Small Protein
Name | NONHSAT049670_smProtein_1283:1339 |
Length | 19 |
Molecular weight | 2125.5061 |
Aromaticity | 0.111111111111 |
Instability index | 85.0277777778 |
Isoelectric point | 4.35198974609 |
Runs | 4 |
Runs residual | 0.0438596491228 |
Runs probability | 0.0306482953542 |
Amino acid sequence | MSDTHILLNYFVLIEMVS |
Secondary structure | LLHHHHHHHHHHHEEELL |
PRMN | - |
PiMo | - |