NONHSAT051821
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT051821 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1412 nt |
Genomic location |
chr16-:707659..709524 |
Exon number |
2 |
Exons |
707659..709001,709456..709524 |
Genome context |
|
Sequence |
000001 CCCACCCCGA CCCCACTGTG TTCCACCTGA TGAGCAGCGA TGGCACCTGC ACCCCAGAGC TGGACGTGCG GGCCAGGACA 000080
000081 TCCCAGAGGA AGACGGCGTC CCCTGCGCTG AGGACCTGCT GCTGGTCAGG AGAGAAGGCC ACAGCCTGCA CGGGTTCCGA 000160 000161 GTGGCCGATG TACACCTAGG GGTAGCGGCG TCACATGCAG GACCCCGAGG CGGGGCATGG ATGCTGCCGT GTGCCCAGTC 000240 000241 CCCAGGGACG GTGAGCCCCA CACAGTGTGA GGCCCCGGAG GCACAGAGGA TCCTTGGGGG GTCACTCTCA CCCCTCACCT 000320 000321 TCTGCTCTCC CTGCCCCCAC CCACACCTGC AGGGGTCTCC AGGGCCACCT GAGGAGGCTC CTGACCGCCA AAGCCACCTG 000400 000401 CCTCCCCACG CACACACCTG GGGGCCTGGG CTGGCCTGTG TGGCGTAGTC CCACACCTTG ATGGTCCGGC CGGCGGCAAT 000480 000481 CAGCAGGAAG CGGGCGTCCT CACTGAGCGT CAAGGAGGGG CAGGGCTCAG GGTGGACACC GGGCAGCTGG AACACAGTGC 000560 000561 TCTTGGGAAA TGCCGTGTCT CAGGAGAGTG GCCAGCAGCC TGGGGCCTCC CTTCGTTGTG GGTGTGGCGA CGGCCCCCCA 000640 000641 CCCAGCTGGA GAGGCTGCAG GCACAGAGGC CAGGCCTGGA CAGCACAGGG AGGGCCAGGT CGGCGGGCCA CAGCCCTGAG 000720 000721 GCTCACCTCC CGGATGATGC GGCCCGACAC AGCATCCAGC ACCACGACTC TGTTGGACGA GGTGGACACC AGCAGGTGGC 000800 000801 CCAGAGCTGC AGGGCCAAAG CACACAGCCA TGGCTGAGTC CAGGCGGCTG CTGGCCAGGT CCAGAGTGCC GATGTCAACT 000880 000881 CGCAGCAGCT GGGGGTAGTG GTAAGTGGCC GACAGTCAGG GCCCCTGGGC AGAGCCGGTG CCACCCAGGG TCAGGCTCGG 000960 000961 GAGGGAGGTC CCGGGGACAC GCACTCGGCA CCCAGGCAGC ACCTGCCCTG CACAGGAACC TGGCCGCACG TGGGCCCCAC 001040 001041 ATGGCTGATG TGTACTCTGC GACAGGAGGC GGGACAGGGC CTGGGTCCTG CTCCCGAGTG GCCGTGACCT CCCTCCTGCC 001120 001121 CCTGCAGCCA GCCTCTCATG GCCCAGTCTC CCTGGACCCA GGAGGGCTGC GGACTCACCT CATCAAGGGA GGCCGAGCCC 001200 001201 ATGACTGTCA CTGTGCACCT GGAGGGTCCC ACAAAGGCCA GCAGGCGGCC ATCCCTGCTG ACTGCCAGGG CGCTGGGGCT 001280 001281 CGCGGGGGCA TCCGGGCATA CCATGTCCGC TGTGGCCACA CGGGGCAGGG GTCAGCTGGG TGGGGAGTGC CGGGGTGCGC 001360 001361 GTGGCCAGGG CCCGAGGAGG CCGCCGCCCC TGCCCCCACT TTCGGGAAAC AC |
Predicted Small Protein
Name | NONHSAT051821_smProtein_29:178 |
Length | 50 |
Molecular weight | 5329.9355 |
Aromaticity | 0.0612244897959 |
Instability index | 71.5265306122 |
Isoelectric point | 7.65106201172 |
Runs | 6 |
Runs residual | 0.0396028681743 |
Runs probability | 0.0322675616794 |
Amino acid sequence | MSSDGTCTPELDVRARTSQRKTASPALRTCCWSGEKATACTGSEWPMYT |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHHEEELLLLLEEELLLLLLLLLL |
PRMN | - |
PiMo | - |