NONHSAT052734
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT052734 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
633 nt |
Genomic location |
chr17-:28120634..28257185 |
Exon number |
3 |
Exons |
28120634..28120955,28175867..28175947,28256956..28257185 |
Genome context |
|
Sequence |
000001 AGTCTGGTGG TGGGTGCGGA GTCTGCGGCC GTTCCCGCGG cctcctcctc ctccccgttc ccttcacccc caccccgcac 000080
000081 ccctttcccc atcccggctc cgtcaccctc ccgtcccccA CACTCAGGAC AAGAATGCCC TGCCCGGAAC AACCCAGCAG 000160 000161 CGCCTAGATG GCTTTGGTCA CGGTCCAGCG GTCACCTACC CCCAGCACCA CCTCCAGCCC CTGCGCCTCG AGCTCTCATT 000240 000241 TGGAAGACAG TGAATCAGCA GCATTACTTT GCTGTGAATG TGAAGAATCA GAAATCTTTA CTGATTCCAA TGAGGCAGAC 000320 000321 AGTGGGGAGG AAGAATGCCG GTCACAGCCC AGGAGGTATG TTTGTTCATT ATATCCTACG GCATTTTTGT TGTAGGATAT 000400 000401 TTTTGTAGTA GTTATTGTTT TTTCTCTAAT TCTTTTTCAG TCTTATCAGA TTAGCTTATC CTTGTTTTTC AACGTGCTTC 000480 000481 CTTGGTCTCT CAAGAAACCA GATTGCACct gggcatggta ttttgtgcct gtaattccag ctacttggga ttgcttaagg 000560 000561 ccaggagttt gagacaacgt atcaggacct tcctccgttt tttaaaaaaa aaaaGAGTAA GAGCGAATGC TTT |
Predicted Small Protein
Name | NONHSAT052734_smProtein_167:394 |
Length | 76 |
Molecular weight | 8154.8621 |
Aromaticity | 0.0533333333333 |
Instability index | 101.221333333 |
Isoelectric point | 4.17401123047 |
Runs | 13 |
Runs residual | 0.0243971631206 |
Runs probability | 0.0456768986181 |
Amino acid sequence | MALVTVQRSPTPSTTSSPCASSSHLEDSESAALLCCECEESEIFTDSNEADSGEEECRSQ PRRYVCSLYPTAFLL |
Secondary structure | LEEEEEELLLLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLEEELLLLLLLLLLEEELLL LLEEEEELLLLEELL |
PRMN | - |
PiMo | - |