NONHSAT052840

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT052840

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3480 nt

Genomic location

chr17+:29234392..29237871

Exon number

1

Exons

29234392..29237871

Genome context

Sequence
000001 TTGAACCTAG GAGATGTAAG GAGAGTGGAA AGAAAAGAAT TATTTCTGGA AGATGGGGAG CCAGTTTTGT GAAAAACGGG 000080
000081 GAATTCAGGA GGGAGGGAAA GGTGATGAGT TTGCGTTTTT ATGAGGCAGC AATGGGTTGA TTGTTTGTGT CTGGAAGGCA 000160
000161 GTGGGGATGT AGGGGAATCA TAAGTATTAA TAAAATGTGC Tggtcgggag cagtggctcc caaagtgtaa ttccagcact 000240
000241 ttgggaggcc gagacgggcg gatcgcttga gctcttgagt tccagaccac cctgggcaac atggcgaaac cccgtctcta 000320
000321 cgaaaaaatt agccgggtgt ggtggagcac gcctgttatc ccagctactc aggaggctga ggtgggagaa tcacctgagc 000400
000401 ccgggaggta gaggttgcag tgagtggaga tcgtgtcacc acactccagc gtgggggaca gagccagacc ttgtctcaaa 000480
000481 aaaagaaaaa aaaTTGCTCA TAGGAAGTCT AGAAACCTTG GCAGTTTCTG GGGAACTTAG GAATCTAACA AGAAATAACA 000560
000561 TCAACTTTTT TCTGCAAAAT CCTCCAAATC AGGAGGAAAT AATTTCCTCA ACTGTAGGGC TTATTCAGTT TACTGAGAtg 000640
000641 ttatgattga attgcatccc tcaaaacaga tttgttgaag tcctaacccc cagtacctta ttatttccaa ataaggtcat 000720
000721 tgtagatgta actaattaaa atgaggacag gaaggccggc acggtggctc acgcctgtaa tcccagcgct ttgggaggcc 000800
000801 gaggaggggg gattacgagg tcaggagatc gagaccatcc tggataacac ggtgaaaccc cgtctctact aaaaaataca 000880
000881 aaaaattagc cgggcgtggt ggcgggcgcc tgtagtccca gctactcagg aggctgaggt aggagaatgg cgtgaacccg 000960
000961 ggaggcagag cttgcagcga gctgagatgg caccactgca ctccagcctg ggcgacagag cgagactctg tctcaaaaaa 001040
001041 ataagtaaat aaataaaata aaatgaggac acgctggact ggggcaggga ctaatccaac atggctgctg ttcttatgag 001120
001121 aagatgactc tgtgaatgcc atgtgaagat ggaagcggag attggaatga tgctttctac aaacccagaa aggccaaggg 001200
001201 ttgccaatag tcactagaaa ctaggagaga ggcatgggcc agagtcccct tagagccctt tgaaggaaca agcccggata 001280
001281 acaccttgat tttgggcttc cagcctcctg aactggagag aataaatgac cagtttgtgg tcatttgtta cagcagccct 001360
001361 aagaaactaa tacaAGAGGC CATAAGGATT CCTGGTGTTG CTTTCAGAGA TGGTCTGGTT CGCTAGCAAG ACACAGttta 001440
001441 tcacttagta actgcatcac catagtcagt ttcttatcct ctctgaacct caccttcctc atttgtaaaa cggagttaat 001520
001521 ggtacctacc tcacagggct gcttggagga tgcatgagaa actggatgca aagaacccag cataagataa gagttcaatc 001600
001601 aatgTGGTTT TGCCCAGTAA AGCATCCCCC CTCTTCCTGA GAAATGATTA TGAATGACCT ATAGGGGAAT CACCCTCCTT 001680
001681 CCTGAAAGCA TTTATTCAGA AATATGCTTT GACCAGAGCC AGAAATACAA AGGAAAGAGA TAAGTATTGC CTGATTTACT 001760
001761 GTAAACCAGA ATTGATGCCT CCAAAATGAA AGTCACCGTC TTCCCCCAAA AACTAGCTCC TTCTCACTTC CCTGTTTTTG 001840
001841 TCACCCAGAT GCAGGTGTCT CTGGCTCTTT CTACTCCTTC CATCATTATG TCTAGCCTGT TATCTAGTTT CTGTGTTTTT 001920
001921 AAAACTTTTG ACTGATCCAG GATACATGTG TGATACAAAA GTTTCATTAA AAAAAAAAAA Aggccaggtg tggtggttca 002000
002001 acacttgtaa taccagcact ttgggagagc aaggcaggca gattcattga gcccaggagt ttacgaccag cctgggcaac 002080
002081 atggcaagac cccatcttta ccaaaaatac caaaaaaaat tagctgggca tagtggtatg cgcctgtagt tccagctact 002160
002161 tgggaggctg aggtgggaga atcccttgag cctgggaggt ggaggtcgta gtgagcagag attgcaccac tgtactcaag 002240
002241 cctgggtggc agagtgagac cctgactaaa tgaaaaacaa aaacaaCCAT TGTATTTTTG CATGTGATAC AACCTGATAT 002320
002321 TTTCTATTTC CTTCTTTTTT TTTTAAGTTA GGAGTGCAAA AGGTTTATTG AAAAAAACAA AAACAAACTA AAATCTGTtt 002400
002401 tgaagcctgc aggacattag agggtgatgt ccaatagata gagatgcaca tctgaagcta aggaggagca ctgagctggg 002480
002481 gtgtatgttt ggaggccgtc agcctgtaga gatggtactt tactcatgag aacagatacg aggagccagg gagagggggt 002560
002561 aggcgtgaga aaagcacagt gagataagga gagaactcct tgggagcacc accattagat gtggttagag gattccgatt 002640
002641 cccaagaaga ttgagaaaca atgttcacat ttaaaaggaa aCAGGAggct gggcactgtg gctcacgcct gtaatcccag 002720
002721 cactttggga ggccaaggca ggcagatcac ctgaggtcag aagttcgaga ccagcttggc caacatggtg aaaccccatc 002800
002801 tctactgaaa atacaaaaat tagccgggcg tggtggtggg cgcctgtaat cacagctact tgggaggctg aggcaggaga 002880
002881 atggcctgaa cctggaggca gaggttgcag tgagccgaga ttgcaccact gcattccagc ctgggcgata agagagagac 002960
002961 tccgtctcaa agaaaaccaa aaaacaaaaa aCACCACATT GCAATACCAC TACACACCCA TGAGAATACC Tactggaaat 003040
003041 ctcatacatt gctgatggaa gtgtgggttg gttgaatcac tttgaaaagc tggcaatatc tactaaagct gaagatttgt 003120
003121 atatcctatg gtcctgcagt ccaaccccgg gtgtatatcc aacagaatgc aaacaaatgt gcactaaagg acatgcaACT 003200
003201 AATGGAGCTA TATGtataaa attgccagta tttgccagtt gtctatttgc aaaaatggca atttcacatg gttaaacctg 003280
003281 aTtacaagaa tgctcatagc agcactattt gtattagcca aaacctCAAT GGCAGATTAT TGTGTATATA Ttgaataaac 003360
003361 gtttcaccca gtaacatggg taaatcccac aaatatgatg ttgaatgaaa gaagccacac agctatatat aaagtacaaa 003440
003441 aacaagccgg gtgcggtggc tcacgcctgt aatcctagca
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Predicted Small Protein

Name NONHSAT052840_smProtein_740:871
Length 44
Molecular weight 4934.6324
Aromaticity 0.0697674418605
Instability index 75.4441860465
Isoelectric point 6.11810302734
Runs 6
Runs residual 0.0177684870656
Runs probability 0.038052758641
Amino acid sequence MRTGRPARWLTPVIPALWEAEEGGLRGQEIETILDNTVKPRLY
Secondary structure LLLLLLLLLLLLLLHHHHHHHHLLLLLLEEEHHHHLLLLLLLL
PRMN -
PiMo -