NONHSAT053385
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT053385 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1161 nt |
Genomic location |
chr17+:37071930..37073090 |
Exon number |
1 |
Exons |
37071930..37073090 |
Genome context |
|
Sequence |
000001 GCAGCGTCCG TCTGGTTCAC CTACTCTGAG CCAGGCCTAG AGCAAGTGAA TAAGCCCAGC AGGAATGGGG TGAGATCAGG 000080
000081 CTTCCTGAGC CCTCAGAGCT GAAGTCCCGG CTCTGTAAGT CCTGCCACTC ACTCCACCCA TGGGTGCCGC TGAGCCACCC 000160 000161 TTACCAAGCT CCTGGCAGGC TCAGCGCCTC CAGGCTGGGT GCCTGGGAAT TCAAAGTAGC TCACGTAGGA GCAGAACAGA 000240 000241 TACTTAGAGA GATAAAATCG CCTGAGATAA TGGCTGGCTG GAGTCTGATG CTCTGGGCAC ACAAACAAAG GGATGTTAGG 000320 000321 ACTGCCCAGG GCACTGTGGG CGCAAGAGTT AGTCTGAAGT ATAAGGTTCC AGGCAGCCCA GCCAGTCCCT CCCTCCTCAA 000400 000401 TGGGTCTGTC CTGGATGTGT AGGGTCCATC TCTGAATATA AAGCCACCTC TCTGCCCTCT GGGGGCTTAC ATTCCAGTCA 000480 000481 GGGGGACAAA CAAGAAAACA ATAAGAAAAT AGGTGTATAA CATAAGGTCA GCGGTGACAC GCTGTGAAGA GAAAGACAGC 000560 000561 AGGGTGAGGG ATGGATAGAA AGCAGCTGGA TTAAGACATT TGGCCGGGGG TGGTGGCTCA CGCCTGTAAT CCCAGCACTT 000640 000641 TGGGAGGCCA AGGCGGGCAG GTCACTTGAG GTCAGGAGTT CGAGATCAGC CTGGCCAACA TGGTGAAACC CCCTGTCTAC 000720 000721 CAAAAATACA AAAATTAGCC AGGTGTGGTG GTGTATGCCT GTAACCTGTA ATCCCAGCTA CTCGGGAGGC TGAGGCAGTA 000800 000801 GAATTGCTTG AACCCGAGAG GCAGAGGTTG CAGTGAGCCA AGATTGCACT ATTGCACTCC AGCCTGGGTG ACAGAGCAAT 000880 000881 ATCTCCAAAG AAAAAAGACA TTTGGCCGGG TGCGATGGCT CACACCTGTA ATCCCAGCAC TTTGGGAGGC CAAAGTGGGC 000960 000961 AGATCACCTG AGGTCAGGAG TTCGAAACCA GCCTGGCCAA CATGGTGAAA CCCTGTCTCT ACTAAAAATA TAAAATTAGC 001040 001041 TCGGCATGGT GGTGCATGTT CATAATCCCA GCTACTCGGG AGGCTGAGGC AGGAGAATTG CTTGAACCTG GGAGGTGGAG 001120 001121 GTTGCAGTGA GCCGAGATCA CGCCATTTGC ACTCCAGCCT G |
Predicted Small Protein
Name | NONHSAT053385_smProtein_269:421 |
Length | 51 |
Molecular weight | 5337.1442 |
Aromaticity | 0.06 |
Instability index | 41.868 |
Isoelectric point | 10.4326782227 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0252016722605 |
Amino acid sequence | MAGWSLMLWAHKQRDVRTAQGTVGARVSLKYKVPGSPASPSLLNGSVLDV |
Secondary structure | LLHHHHHHHHHHLLLHHHHLLEEEEEEEEEEELLLLLLLLLLLLLLEEEL |
PRMN | - |
PiMo | - |