NONHSAT053428
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT053428 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
564 nt |
Genomic location |
chr17+:37360417..37360980 |
Exon number |
1 |
Exons |
37360417..37360980 |
Genome context |
|
Sequence |
000001 CAAGGCCCGC AAGAAGCTCC TGGCGTAAGT TTCTTTTCAG AGTCTTAGGG GAACATTCTT AGACCTTTGA GAGTTGTTCT 000080
000081 TAGATACTTA AAATGTGCCA ATGCCTAAGT CTTGACTTGC ACGTAGTCTG TCTTAGGAAT ACAGCTGTTC CCTTAGAGGC 000160 000161 ACCCACTCCT CTGTCCTGTA CACACCCACT CTTCCTGTCT CGTAGGGACT AGAGGTTAGT TGAAGCAGGA GCCTTTGGTG 000240 000241 GGCCCAGCAA CTCATTCCAG AAGCTGACTA GGCTCAAAGG GAGAGGTCTG GGGATGTGCT TCTGTCTCCC TAGCATCTCA 000320 000321 TCTCTTCCCA AACTGACCCG TCTTTTCTCT TCCCTGACCA GTGACCAGGC TGAGGCCCGC AGGTCTAAGA CCAAGGAAGC 000400 000401 ACGCAAGCGC CGTGAAGAGC GCCTCCAGGC CAAGAAGGAG GAGATCATCA AGACTTTATC CAAGGAGGAA GAGACCAAGA 000480 000481 AATAAAACCT CCCACTTTGT CTGTACATAC TGGCCTCTGT GATTACATAG ATCAGCCATT AAAATAAAAC AAGCCTTAAT 000560 000561 CTGC |
Predicted Small Protein
Name | NONHSAT053428_smProtein_293:484 |
Length | 64 |
Molecular weight | 7370.4953 |
Aromaticity | 0.031746031746 |
Instability index | 84.7523809524 |
Isoelectric point | 9.85882568359 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.0399517164222 |
Amino acid sequence | MCFCLPSISSLPKLTRLFSSLTSDQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEE TKK |
Secondary structure | LEEELLLLLLLHHHHHHHHHLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLHHHH LLL |
PRMN | - |
PiMo | - |