NONHSAT053429

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT053429

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1782 nt

Genomic location

chr17+:37394028..37401340

Exon number

6

Exons

37394028..37394166,37394649..37394800,37394940..37395008,37396261..37396367,37399454..37399585,37400158..37401340

Genome context

Sequence
000001 GTGCAGCCCA ACCCCACGCT GAGCTGTTTC ACAGCCGGCC CTGCCCCCTC TCCAAGATGC TGTTTTGGCA CAACCAGCCG 000080
000081 GAGCATCTAT GGCCCAGTCC TGGGGACCTA TACCCTGGGC CCCCCAGCAG CCTGCTCAGG GAGCCCCTGC CCTTGCCCTA 000160
000161 CTTGAAGCAG GAGGAGCTGC CCAACATCCC TGGCACGGAG CTGCCCTGCC CCATGTTCTA GTACGTGCTC TGTGCAGCCA 000240
000241 CCTCGCCAGC CGTGAAGCAG CAGGAGGAGA CCCTCACCTA CCTGAACCAG GTCCTATGAG GTCCGGATGC TCTGCAGCTC 000320
000321 CAAGCCGTGT GATGCCACCC AGTGCCCCCA GCTGCTGAAG ATGTGCCACT GTCCGTGGGA GTGATAGAAC CCCAAGTGCT 000400
000401 GCTCTCACAA CTCAACATGG TGGAGTTTCA CTGGGACCCA ACAAAGAGGA CATCTCTCTT CCTGCAGTTC ACACCTCGGA 000480
000481 AGAAAGGTGG AGAGAAAGGC ATCCCTTTCC GCCTCCAGAT CGACACCTTC AGGCCCAGTG ACAAGGGGCT GCCGCTAGAC 000560
000561 CACCTGCACT CAGCTGGCTG CCTCATCAAG GTGTTTAAGC ACAAAGGAGC GGAAACTGAA AATGGACCGT GAGAAGATGG 000640
000641 AGAAACAGCC CCTGCATGAG AGGGACAAGT ATCAGACCGC CTGCGAGAGC ACTGTCTTCT TGGAGGTGTG TGTGTTGGGG 000720
000721 CGAGAGCAGG AGGGGAGAGT TGGAGAAAAG ATCCTCACGG TACAGATGGG GAAATGGAGG CCTCCAGGGC TCTGACTGCT 000800
000801 GCAAGCCCAT CACAGCCCCC TGGGGACTCC ACCACTTCCT GCAAAGGACA CTCTCTGCCC TGTCTGTGGT TGTTGAAGCT 000880
000881 TCCAGGAGCT GACGCCCTCC AGGCTGCCTG TCCTACGCGG GCCATCGCCA CCTCCTTCCT TGTGTGCTCC CTCTGCCTGG 000960
000961 CCCCCTCCTC CTCCTGCTGC TCCTCCTGGC CAGCTCCTCC AAGGCCCTTC CTCACTGCCC CAGGCCCGCC GGGTGGTTAA 001040
001041 CTTCTTCCTT CCTGTGGAAA CCCAGTCCAC TTGTCAGGCC CCTGGTCAGC TCTTAATATA CAGGTGGAGA GAAGGGAGCA 001120
001121 ATGACCAGCC TTGCTGTGTG TTTGCCTGCA GTGTTCGCCA TGGCCGGAGT CCCCTGCAAG GCCCCGGCCA CCTCTCAGCT 001200
001201 CTCTGGCTCT GACCTCTCCC CACTCCTGCA GGCTCTTGTC CCCAGAAAGG TGAGGCAGGA TGAGCACCTC CTGTCAGCCC 001280
001281 TTTGGGGTGA GAGTGAAGAA AAGAGCTCCC AGCCCAGGCA TGGAGCAAAG GGCAGGGCTG GGGATTGGTG GGGAATTTGT 001360
001361 GGGGTGAGGA CAGGAGCAAG CTCTGTGTCC CAGGGCAGGC CTGGAGGAAG GGTGTTGGTG GAGGGAGACT GGCTGTAATG 001440
001441 CTCCGCAGAG TTCTTGAACC TTTGCTCCTC CTCATAGGCT CTGTTCCTCA CCACCATTCG CTCTGGATAC CTTGGGGTGT 001520
001521 AGCCCAGTTG AGGTGAGCCT TCCCCTTCCC ACTCTCCACT GTCCCAAAGC CTTCTCCGCA GCTTCATCTC AAGCTCCAGA 001600
001601 ATGGAGTGGC CCTGCCCCCT GGTGGCCAGA TGTGATATGG CCATAGATTG TAACTTACCT GATAAGACTG GGCAGGAAGA 001680
001681 GCCTCCCTTC TCAGACTTGG GACCTCCCAA GGGAGGGGCT GTTTCCCTTT CTTGTTCTGT CCCTGGGTCC TGGTATTACC 001760
001761 TGGACCATCC ATTTTATACC TC
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Predicted Small Protein

Name NONHSAT053429_smProtein_773:1039
Length 89
Molecular weight 8837.151
Aromaticity 0.0454545454545
Instability index 80.2829545455
Isoelectric point 8.23516845703
Runs 10
Runs residual 0.0177272727273
Runs probability 0.049841017488
Amino acid sequence MEASRALTAASPSQPPGDSTTSCKGHSLPCLWLLKLPGADALQAACPTRAIATSFLVCSL
CLAPSSSCCSSWPAPPRPFLTAPGPPGG
Secondary structure LHHHHHHHLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLHHHHHHHLLLLHHHHHHHHHHE
EELLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHH
HHHHLLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTT
TTTToooooooooooooooooooooooo