NONHSAT053677

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT053677

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2564 nt

Genomic location

chr17-:40166608..40169171

Exon number

1

Exons

40166608..40169171

Genome context

Sequence
000001 CCGCTTCCGC CTGGCGTAGG AGCTGAGGCA TGGCCTTGTT CTCCAGCTGA GAGGACGATC GTCCTTATAG GAGAGGCCGA 000080
000081 GTCTCCGAGG GCAATTTCAG AGGTCTGGTG CGAGGTGGGG GAAGCGGCGC GGCGTCGATG ACGACTTCCT TACATCGCCC 000160
000161 CCGACCCCCG CGTTCTCTTG TTAACTTCTG TGCATTGTTG CCTGTCTGCA CTTTCCGTCT CCAAAACCTT TGCTCTCCTC 000240
000241 ACCCCGTTTT CCCTTGTAAT TATACCCCAG CGATCACTAG TCTGGGTTCG AAGTGATTGT GTGTCTCCAT AATTGACCTG 000320
000321 GTTGCCCCCG GTTATCCCAG AAGTCAAAGA TGACAGAGAA AAAAAGGAAG AGCGAGGGGC TTATCTCGTG TTCTCTACGT 000400
000401 CAGACTCCTC TTCCCCTGTC CTTCCTGGGT GATCTTTATC CTTCCCAGCA CTGTTCTTTC TTAAGTTAAG CACCAAGGAA 000480
000481 GAGGGCAACT GCTTGGGCGC TGTTGGCACT CCGAAGCAGC CGCAGTGGTT CGAGATTGCC AGTCGGACTA GCCAAGGGAG 000560
000561 CTGCTGAGTG AGTGGTTTTC GAGAACGCTC TAGATTCTGG CAACAGTTAG GCCAGATTAT TGGAAGTGGG GTTGGAACAG 000640
000641 AGTTGTGGGT AGTCATACTT GTTCTAATCC TAAAGCAGAA TTGACAAGAA GGTTCTAGAA GTTTGGAGCC CTTTCCTTAT 000720
000721 CAGCTGCGGG TTAGTCTGAC CCTTTTGTTC AAGATATCTA CAGTGCCCTC AGTCTCTTTG CAACATACTT TATATCTTCA 000800
000801 TACCAAGCCC GTTGTGTCTT CAGGCTGGGT AATTTGAGGC GGTGATGTAG AATTAGTTCA TGAGATCTGA AATCAGGATT 000880
000881 CTGAGATTTT TACTATCTAA TGAGTTCGAA ATATAAGAAG TACTCGGACG CAATGAATAG TTATCAAGCT TGAGGGTGGT 000960
000961 TACCACAGCC AGATCTCAAG TTCCTGATCT GCTGGGAGCT GAGGGGCCTG ACAAAGTGTA ATAGGCCCCT GGGATATCAG 001040
001041 AGAAGCCAGG ACACCAGAGT CCAGTCTCTG TTCTTAATTT TGAGCTTTCA TGTTGTTCCT ACTTCTTCCT AGATATTTAA 001120
001121 AGCTAAGCAT CATCAACCCT TATACATCAT TAAAGAGCTG CACAATGGGA AACAAAATTC CTCCCAGTGC AGACGGAGCT 001200
001201 TAAATTAATT GTAGAGATTT ACTTGTATTT GGAAAGAGTT CAGTGGTTCT TTATACTGTA AATAGGGATT TGGCCACAGG 001280
001281 ttatttattt tttatttttt gagacggaat ctcgctctgt cgcccaggct ggagtgtagt ggcgcgacct cagctcactg 001360
001361 caagctccgc ctcctgagtt cacaccattc tcctgcctca gcctcaccag ttgctgggac tacacgtgcc caccaccaca 001440
001441 tccggctaat tgttgttttt tttttgtatt tttagtagag atggggtttc accctgttag ccacgatggt ctcgatctcc 001520
001521 tgacctcgtg atccgcccac ctcggcctcc caaagtgctg ggattacagg cgtgagctac tgtgccgggc TGGCCATAGG 001600
001601 TAATTTTAAA AACTCACCCT ACTCATTGTA AATCTCTGAT GTAGAGTGTC CCTATTTTGG ACTTCATTTC ATAGCCTCCT 001680
001681 ATCTTAAGCA AATACATTTC TTCAATCACA GCCTTAGAGG ATAGTCTATC ATAAAATTGG AGTAAATGAA CCTGAAGACA 001760
001761 TATAATAAAA TAGGTTATGC TGTAATGTGA CCACATCACA CAAAACATGG TATTTGATAG CAGTACAACA AAATAAGGTA 001840
001841 AACTAcctta tttcatggaa tttaagtgtc attaggctgg gtgcagtagc tcacacctgt aatcccagca ctttgggagg 001920
001921 ccgaggcagg tgggtcagct gaggtcggga gtttgaaacc agcatggcca acatggcaga accctgtctc tactaaaaat 002000
002001 acaaaaatta gcggggcgtg gtggcacaca catgtaatcc cagttacacg ggaggctgag gcaggagaat cgcttgaact 002080
002081 caggaggtgg aggttgcagt gagctgagat cgggccattg cactccagcc tgggtgacaa agtgagattc catctcaaaa 002160
002161 aaaagtcatt gattgcagaa tgcaaattat tttatctgtc actaagaaaa tgtaactgta aattaaacat gacaacatgc 002240
002241 attattCCTG TAGTTCAAAT AGTgacagaa aaaaattaat taaaaaaaga aaaaagactg ggcgtggtgg ctcacacctg 002320
002321 taatcccagc actttgggag gccaaggcgg gtggattacc tgaggtcagg agttcgaaac cagcctgact aatacggtga 002400
002401 aaccccatct actaaaaata caaaaattag ccaggtgggg tgatgctgta atcccagcta gtcaggaggc tgaggcagag 002480
002481 gttgtggtga ggggagatca tgccattgca ctccagcctg ggcaacaaga gcaaaactcc gtctcaaaaa aaaaaaaatc 002560
002561 aatt
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Predicted Small Protein

Name NONHSAT053677_smProtein_137:295
Length 53
Molecular weight 5783.7967
Aromaticity 0.0769230769231
Instability index 61.2692307692
Isoelectric point 9.69158935547
Runs 9
Runs residual 0.0227075184702
Runs probability 0.0229052581994
Amino acid sequence MTTSLHRPRPPRSLVNFCALLPVCTFRLQNLCSPHPVFPCNYTPAITSLGSK
Secondary structure LLLLLLLLLLLLHHHLHHHHLLLLLEELLLLLLLLLLLLLLLLLLHHHLLLL
PRMN -
PiMo -