NONHSAT053730
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT053730 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
716 nt |
Genomic location |
chr17+:40717480..40718295 |
Exon number |
2 |
Exons |
40717480..40717823,40717924..40718295 |
Genome context |
|
Sequence |
000001 TCCCCACAGG AAAGCGTGTG TGTGTGATTG ATGCCGCTGT GTTGCTTGAA GCCGGCTGGC AGAACCTGGT CCATGAGGTG 000080
000081 TGGACTGCTG TCATCCCAGA GACTGAGGTA TCTCGCCCCA CCCCCCACAC CATCCCTACT GCAGATCCTA TCCTGTGAGC 000160 000161 TGGAATTCTT CCTGACAAAT GTCTCGTCTG TGCTCAGGCT GTAAGACGCA TTGTGGAGAG GGATGGCCTC AGTGAAGCCG 000240 000241 CGGCTCAAAG CCGGCTGCAG AGCCAGATGA GCGGGCAGCA GCTTGTGGAA CAGAGCCACG TGGTGCTCAG CACCTTGTGG 000320 000321 GAGCCGCATA TCACCCAACG CCAGGTGGAG AAAGCCTGGG CCCTCTTGCA GAAGCGCATT CCCAAGACTC ATCAGGCCCT 000400 000401 CGACTGAAAA GTTCTCAGTG GGGCCAGACT GGCTCCTGGA GCTGACAAGC GACCCCGTGG TGAGGAGAAA TGGGGGCCTT 000480 000481 GATGCTCACC CTGGTTCAGG CCCAGAGGTC CAAGCTATAC TGTGCAGGAC ATGGCCAGGC CTGGTGGACA CAGGAAGCCT 000560 000561 ACCCAACACG CTGGTATTTG GCCAACACTG AGGATGTGGT TCATGGGGGA GCAGTCCCCT CCCCACTCTT GCCCATGGGT 000640 000641 GACTCTTACC CACAGCTGAC TAGGGCCAGC GCAAATACTG GAACCTGTAA CAGAATTAAA GGTGAATGTT CTGAGA |
Predicted Small Protein
Name | NONHSAT053730_smProtein_266:406 |
Length | 47 |
Molecular weight | 5360.1149 |
Aromaticity | 0.0434782608696 |
Instability index | 67.3369565217 |
Isoelectric point | 8.31317138672 |
Runs | 8 |
Runs residual | 0.0125517598344 |
Runs probability | 0.0280096272744 |
Amino acid sequence | MSGQQLVEQSHVVLSTLWEPHITQRQVEKAWALLQKRIPKTHQALD |
Secondary structure | LLHHHEEELLLLLLLLLLLLLLLHHHHHHHHHHHHHLLHHHHHLLL |
PRMN | - |
PiMo | - |