NONHSAT053751
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT053751 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
838 nt |
Genomic location |
chr17+:40839279..40840596 |
Exon number |
2 |
Exons |
40839279..40839999,40840480..40840596 |
Genome context |
|
Sequence |
000001 ttagttcata gatgaagaaa gtaaggcgca gacacaggga gtggcttgtc caggggtcgt gcagctgcac ggtggctgag 000080
000081 tagggacttg aaccgatggc ttctCTGATA TGCCCCCCTC AACCCTCTCC GACTCTGGAG CTCTGTTGGG AAGCTGGCAG 000160 000161 GAGCCAGGTC TGTGGTCCAA AATTGCCTCT CGATACTGGA AGGAGAGAAG CGGTCGAATC GCAGACGGTG GAGATCAGCG 000240 000241 AGAGCAAGCG AGCAGAGTTC CGAGGGCCGA CTGGGTTGGG GCCCCCTCCA CAGATGGACG AGCTTGGAGG GGAAGAGGTC 000320 000321 ACGTCATGGT TGGAGATCTC ACCCCCGCCA ACACCGAAGG AGGGCGGTGA CCAGGGTCTT AGACCGGTGT GAAAACTGAA 000400 000401 TTCCCAGCTG AGGCAGAGGC GGCTCACGGG TGTTGATGCG TCTTCACTTT TGCCCCTAGG GTAAGGTGGC TTTTCGTTGC 000480 000481 CTGGACCCGG TACCGCACCC TATCAACTTC GGAGGCCCTC ACAACTTCGT TCAAGTGCCC GGTTTCCCAC GCCGTGGCCG 000560 000561 CCTGGCAGTC TCATTTCGCT TCCGCACCTG GGACCTCACC GGGCTTCTCC TTTTCTCCCG TCTGGGGGAC GGGCTGGGCC 000640 000641 ACGTGGAGCT GACGCTCAGC GAAGGGCAGG TCAACGTGTC CATCGCGCAG AGCGGCCGAA AGAAGCTTCA GTTCGCTGCT 000720 000721 GGGTACCGAC TGAATGACGG CTTTTGGCAC GAGGTGAATT TTGTGGCACA GGAAAACCAT GCAGTTATCA GCATTGATGA 000800 000801 TGTGGAAGGG GCAGAGGTCA GGGTCTCATA CCCGTTGC |
Predicted Small Protein
Name | NONHSAT053751_smProtein_95:391 |
Length | 99 |
Molecular weight | 10491.7288 |
Aromaticity | 0.030612244898 |
Instability index | 77.1673469388 |
Isoelectric point | 4.56463623047 |
Runs | 13 |
Runs residual | 0.00638947167652 |
Runs probability | 0.0443044854809 |
Amino acid sequence | MASLICPPQPSPTLELCWEAGRSQVCGPKLPLDTGRREAVESQTVEISESKRAEFRGPTG LGPPPQMDELGGEEVTSWLEISPPPTPKEGGDQGLRPV |
Secondary structure | LEEEELLLLLLLLHHHHHHLLLLEELLLLLLLLLLLEEEEEEEEEEEELLEEEEEELLLL LLLLLLLLLLLLEEEEEEEEELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |