NONHSAT054333
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054333 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1237 nt |
Genomic location |
chr17-:45917027..45918627 |
Exon number |
2 |
Exons |
45917027..45918209,45918574..45918627 |
Genome context |
|
Sequence |
000001 AGAAGCGGAG GAGGTGGCAC CCGGGACCGA GCTGGGGTCT TGGAGGAAGA GAGGATGGCG TCGTCGAGCC CTGACTCCCC 000080
000081 ATGTTCCTGC GACTGCTTTG TCTCCGTGCC CCCGGCCTCA GCCATCCCGG CTGTGATCTT TGCCAAGAAC TCGGACCGAC 000160 000161 CCCGGGACGA GGTGCAGGAG GTGGTGTTTG TCCCCGCAGG CACTCACACT CCTGGGAGCC GGCTCCAGGT GGGTTAGACT 000240 000241 TTATGGGGTG CTGGGAGGTG TGGCAGATCT CTGCATTCTT TTAAGACCTT CTTCCCTGCT CCCCACACCT GGGAGGCTGC 000320 000321 CAGAAGTAGT GGAAGAGCAT gagctttagg tctaccaacc tggacctgag ctcattatgt agcctcagtc tacctcagtt 000400 000401 tcctcttctg taaaatggga atgagacctt cctcaaaggg atctataagg taattggcag agtgcCACAC TCGAGGGGCC 000480 000481 GCCCCTCTAT GAGTGGACGC TTCCTTTCTC CTCCCTCACC TCCAGTGCAC CTACATTGAA GTGGAACAGG TGTCGAAGAC 000560 000561 GCACGCTGTG ATTCTGAGCC GTCCTTCTTG GCTATGGGGG GCTGAGATGG GCGCCAACGA GCATGGTGTC TGCATTGGCA 000640 000641 ACGAGGCTGT GTGGACGAAG GAGCCAGTTG GGGAGGGGGA AGCCCTGCTG GGCATGGACC TACTCAGGTG CAGACCCTGC 000720 000721 CCTTCCTCAT CTGCCTGACA CACCAGAAAT CTAGGGGCTG AGTTTTGACC TGGGCCCATC CATCCCTCCC CCAGCCTGGT 000800 000801 TCACAGGGGC CTCCTCCTCT CTGCAGACTT TGCCCTTGTG CCTTCGTGAA GAAGGCTGCA GCAGCAGCCA CCTTTGGGCC 000880 000881 TCTCCTGGCC CAGAAATAGA GCAGTGGTTA TTTATTTAtt ttcagttgaa atcttacata gagtcccaat ttataaaacc 000960 000961 agtaatagtg gatggagcag ctctgggtgg agagaggtta ggggctcagG ACACTTCTCT CTCTGAAACT GTGTTTCAGG 001040 001041 CCTTTTCATG GAACCCTCAA agcatagcac atggaaccag agcattgaaa gccactggca taattgcatt tgatacgatc 001120 001121 agtgccagca gatttgctgt gtgacttggg cctatcacca aacctctccg ggcctcTTCT GTCCCCTGGA GCTTCTGCCA 001200 001201 CCAGCCATTG ATCCCTCTGT CACCCTTCTG TCCCTTG |
Predicted Small Protein
Name | NONHSAT054333_smProtein_80:283 |
Length | 68 |
Molecular weight | 7267.3441 |
Aromaticity | 0.10447761194 |
Instability index | 52.7402985075 |
Isoelectric point | 6.79559326172 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.0409625311586 |
Amino acid sequence | MFLRLLCLRAPGLSHPGCDLCQELGPTPGRGAGGGVCPRRHSHSWEPAPGGLDFMGCWEV WQISAFF |
Secondary structure | LEEEEEEELLLLLLLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEL EEEEEEL |
PRMN | - |
PiMo | - |