NONHSAT055654
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055654 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
520 nt |
Genomic location |
chr17-:70067196..70116946 |
Exon number |
5 |
Exons |
70067196..70067372,70078062..70078182,70080047..70080169,70081131..70081186,70116904..70116946 |
Genome context |
|
Sequence |
000001 GGGGTGCTGC GGGGAAGGCG GGGGACCCGG GACTTCCAAG TGTccaaaaa caatccattg atacaCTTGG TGACATTAAT 000080
000081 TGAGAAAAAA ACAATATGGT CTGGCCATGG AGGCATGGTA TCCGTAACAT CCCCCAAAGG AGCTAAAGAA GAAATCCACA 000160 000161 ATTTACCATG AGCATTTCTC GTCTGAAGAT TGCCAAGCGA TTCCTCCAGG ACATTCCTCA AGATCAATTT CTGTTCATCC 000240 000241 ACCTTGTCCT GGGAGGGACA TCAATGggtt tccatgtcct ttggcttctg gttgagttca ctcagtggag aaccctggca 000320 000321 agaggcagga aaaggggagg aagGTGAAAA CCATCCATTT CTTGGAGAAG TGCCACGGTG GGGTTGCAAG TCCCAGGATC 000400 000401 AAGTTTTCGA TGTGTCTCTT TTTCCCGTAA AGTGGCTGAA ATCTGAAGCT GAATCTGCAA GTGTCatgga gtcattgaat 000480 000481 ctcacagtct caactgataa aagttattaa aggtcgtctg |
Predicted Small Protein
Name | NONHSAT055654_smProtein_167:346 |
Length | 60 |
Molecular weight | 6927.1613 |
Aromaticity | 0.118644067797 |
Instability index | 49.0525423729 |
Isoelectric point | 11.8848266602 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0624321800793 |
Amino acid sequence | MSISRLKIAKRFLQDIPQDQFLFIHLVLGGTSMGFHVLWLLVEFTQWRTLARGRKRGGR |
Secondary structure | LLHHHHHHHHHHHHHLLLLLEEEEEEELLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii |