NONHSAT056024
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056024 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
822 nt |
Genomic location |
chr17+:74534498..74540452 |
Exon number |
4 |
Exons |
74534498..74534589,74536587..74536655,74539111..74539203,74539885..74540452 |
Genome context |
|
Sequence |
000001 CTCTCCTTCC GCCCAGCACC TCCATGCCCT CGGTGCACGA ACGCGGCGGC GGCGGCCAGA AGTCCCCCGT GGCTTATGAA 000080
000081 TGACACGGAC AGAGAGCCCA GCGACGTGGA TGGGGCAGCT AGGGGCAGCA GCTTGGATGC GGACCCTCAG TCCTCAGGCA 000160 000161 GCTCAGGTCC TGGTTCGTCC CCTAGCCCAG GAGGATGCTG TGGGAGCTGC AGCAGCGGCA AGAGGGAGAA TGGGGGGAAG 000240 000241 CAGCACTAGA GAAGttccca gagctcatcc tgtcactggc tgctctgctg aaattatcaa taagaaatgc cagttggatc 000320 000321 tgtgacatgt ctgcctgcag ctggatggga GCAACGGACA GCTTGTCCTC CGAATGTGTT TTCTGTATGT GTGCAAGCGC 000400 000401 GTGTGTTCCA AACGGGCAGT AGCGTGTGGG AAGGAAAAAG CCTGACACTT GTTTTTATCA ATTTGCTGAT GCTCAGTCCC 000480 000481 GGCGGCTGCC TCCTTTGCCC CCAGCTGCTC TGCCATTTCT CTCTTTTCAA TCCTGCATGA TCCTGAGCAG AGATAAAAGC 000560 000561 AGATTTCCGC TTCTGCTCCC AGATCCAGGA GCAGACCCTG CAGGCAGCTG CTCCTGATGT CTCACAGCTA TTAGTCTTCA 000640 000641 AAAACCCCCC GTGCCTCTGT GCACACGCGT CTCTCCTCCC CAGCCAGCCC CCCTCCCAGC CCAGCGGCGA TGTCTCTGCC 000720 000721 TGGCTGGCCC GTGCCCTTGA CTTCCAGGCA GTAGAAGATG GAGTTCTCTA GACAGCAGCA CTTCAGCCGC CACTCTGCCT 000800 000801 CTGAAGGGAA GGAAGGGAAA GG |
Predicted Small Protein
Name | NONHSAT056024_smProtein_194:421 |
Length | 76 |
Molecular weight | 8260.5018 |
Aromaticity | 0.08 |
Instability index | 65.144 |
Isoelectric point | 4.29376220703 |
Runs | 10 |
Runs residual | 0.0156028368794 |
Runs probability | 0.045354177707 |
Amino acid sequence | MLWELQQRQEGEWGEAALEKFPELILSLAALLKLSIRNASWICDMSACSWMGATDSLSSE CVFCMCASACVPNGQ |
Secondary structure | LHHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLHHHHLLLLLLLLHH HHEEEELLLLLLLLL |
PRMN | - |
PiMo | - |