NONHSAT056029
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056029 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1381 nt |
Genomic location |
chr17+:74539885..74549660 |
Exon number |
4 |
Exons |
74539885..74540452,74541612..74541718,74541978..74542213,74549191..74549660 |
Genome context |
|
Sequence |
000001 ttcccagagc tcatcctgtc actggctgct ctgctgaaat tatcaataag aaatgccagt tggatctgtg acatgtctgc 000080
000081 ctgcagctgg atgggaGCAA CGGACAGCTT GTCCTCCGAA TGTGTTTTCT GTATGTGTGC AAGCGCGTGT GTTCCAAACG 000160 000161 GGCAGTAGCG TGTGGGAAGG AAAAAGCCTG ACACTTGTTT TTATCAATTT GCTGATGCTC AGTCCCGGCG GCTGCCTCCT 000240 000241 TTGCCCCCAG CTGCTCTGCC ATTTCTCTCT TTTCAATCCT GCATGATCCT GAGCAGAGAT AAAAGCAGAT TTCCGCTTCT 000320 000321 GCTCCCAGAT CCAGGAGCAG ACCCTGCAGG CAGCTGCTCC TGATGTCTCA CAGCTATTAG TCTTCAAAAA CCCCCCGTGC 000400 000401 CTCTGTGCAC ACGCGTCTCT CCTCCCCAGC CAGCCCCCCT CCCAGCCCAG CGGCGATGTC TCTGCCTGGC TGGCCCGTGC 000480 000481 CCTTGACTTC CAGGCAGTAG AAGATGGAGT TCTCTAGACA GCAGCACTTC AGCCGCCACT CTGCCTCTGA AGGGAAGGAA 000560 000561 GGGAAAGGGG TGCTGGCTAC TGTGAAataa caagagtcca agagcaaggt gtccagagtc agagctcctg ggtttgaacc 000640 000641 ttgttccacc agcacatcct acctctgtgg cctggAGCTG GGCGACCGGT AGTTCTGCAA CAGATCAGAG GATGGCAGAG 000720 000721 GGTGGCATTG CTGGGGTGGG GAAGCCCCCT GTAAGCCTGT ACTGGAGAAG ACCACCACTG CCTCTCTGTG CCCAGAACCA 000800 000801 TGTCCCAACC TCCAGTGGTG ACCTCGACCT GGACAGCGCC ACTCCCAGCT GGCTCTGCTT CCGGAATGAA CCTCAGCTCC 000880 000881 TTGACAAGAC GGGAGGCGCT GCCCTGCTGT Gtccttcagc tcctacttaa tggaagcctc gcagatgcaa gatggctcca 000960 000961 gcaggcccag catcacttct tctcagtgtc ccaaagccag aagagaggct gttgttttta aaagcaggaa aactttccta 001040 001041 aacttggcca gaattgcatc acagaccctt tcctaaaaca atttccagca aagggaatag acttaccatg tctggtacag 001120 001121 atgaatcaag gtttgcccct gggggctggg gaggggcttg tcccgctgaa gcagactctt gcccagcagc tgaacgaagc 001200 001201 ctaggttcac cagacggagg aagagactgg ccactaacag tgcctgacac aCAGATGTGC TTCCTGTGAT ATCGCTGCTG 001280 001281 CCACCGTTCC AAATGTAAGC AGTTGGCTGT CTGGGATACT ACCTACCTTC TTTTGTGTTC TTATTAATAA AATTAAAGAT 001360 001361 TGCTTTCTGG GTAGAGAAAT T |
Predicted Small Protein
Name | NONHSAT056029_smProtein_929:1075 |
Length | 49 |
Molecular weight | 5301.0066 |
Aromaticity | 0.0416666666667 |
Instability index | 62.1604166667 |
Isoelectric point | 10.8866577148 |
Runs | 6 |
Runs residual | 0.0405701754386 |
Runs probability | 0.0414237767179 |
Amino acid sequence | MEASQMQDGSSRPSITSSQCPKARREAVVFKSRKTFLNLARIASQTLS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLHHHHHHHEEELHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |