NONHSAT056210
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056210 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
747 nt |
Genomic location |
chr17+:76212508..76219937 |
Exon number |
2 |
Exons |
76212508..76212862,76219546..76219937 |
Genome context |
|
Sequence |
000001 ACATTAGCCA CACAGATGTG GGGGGAGATG TCCACAGGGA GAGAGAAGGT GCTAAGAGGT GCCATATGGG AATGTGGCTT 000080
000081 GGGCAAAGCA CTGATGCCAT CAACTTCAGA CTTGACGTCT TACTCCTGAG GCAGAGCAGG GTGTGCCTGT GGAGGGCGTG 000160 000161 GGGAGGTGGC CCGTGGGGAG TGGACTGCCG CTTTAATCCC TTCAGCTGCC TTTCCGCTGT TGTTTTGATT TTTCTAGAGA 000240 000241 GGAACATAAA AAGCATTCGT CCGGTTGCGC TTTCCTTTCT GTCAAGAAGC AGTTTGAAGA ATTAACCCTT GGTGAATTTT 000320 000321 TGAAACTGGA CAGAGAAAGA GCCAAGAACA AAATTGCAAA GGAAACCAAC AATAAGAAGA AAGAATTTGA GGAAACTGCG 000400 000401 GAGAAAGTGC GCCGTGCCAT CGAGCAGCTG GCTGCCATGG ATTGAGGCCT CTGGCCGGAG CTGCCTGGTC CCAGAGTGGC 000480 000481 TGCACCACTT CCAGGGTTTA TTCCCTGGTG CCACCAGCCT TCCTGTGGGC CCCTTAGCAA TGTCTTAGGA AAGGAGATCA 000560 000561 ACATTTTCAA ATTAGATGTT TCAACTGTGC TCTTGTTTTG TCTTGAAAGT GGCACCAGAG GTGCTTCTGC CTGTGCAGCG 000640 000641 GGTGCTGCTG GTAACAGTGG CTGCTTCTCT CTCTCTCTCT CTTTTTTGGG GGCTCATTTT TGCTGTTTTG ATTCCCGGGC 000720 000721 TTACCAGGTG AGAAGTGAGG GAGGAAG |
Predicted Small Protein
Name | NONHSAT056210_smProtein_65:304 |
Length | 80 |
Molecular weight | 8971.492 |
Aromaticity | 0.113924050633 |
Instability index | 60.564556962 |
Isoelectric point | 10.7059936523 |
Runs | 9 |
Runs residual | 0.0263568579851 |
Runs probability | 0.0643094074467 |
Amino acid sequence | MGMWLGQSTDAINFRLDVLLLRQSRVCLWRAWGGGPWGVDCRFNPFSCLSAVVLIFLERN IKSIRPVALSFLSRSSLKN |
Secondary structure | LLLLLLLLLHHHHHHHHHHHHHLLLEEEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHHL LLLLLHHHHHHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHH HHLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTT TTiiiiiiiiiiiiiiiii |