NONHSAT056758
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT056758 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
929 nt |
Genomic location |
chr17+:80895446..80900580 |
Exon number |
5 |
Exons |
80895446..80895835,80895925..80896012,80897243..80897352,80899275..80899359,80900325..80900580 |
Genome context |
|
Sequence |
000001 CGAGCTCTGC CTCTGCTGCC CTCGCGCTCT GCCCTGGCGG GAGGGGAGGC TCCGGAAAGG AGCTGCGTGG TCAGGGGCTG 000080
000081 CCTCCCCGAT TCTCCTGTGT GCCCTGGGGG TCGCTGTTGA GTGCCTTGCT CTGCGGCGCT CAGGTGGACA CTGGGCAGGT 000160 000161 GCGCCAGCCA GCGATAGGCA CCTTGGCTGC TCTGTGGCTC CTTGAGGTGG GGGTCCTCAT GGCAGGGCGA GCGGCCCTGC 000240 000241 AGGAGATCCT CTGTGAGGCG TCCTCACTTC CCACAGTGAC TTTCCAAGTG CGACACTCGT GTGTGTAGGC ACAGTGCAGA 000320 000321 TGTACGCACA CACACACCTC CGGCTTGGGG CCCCAGGCCC GCACTGTGCT CACGGATCTG CTCTGCCCAG GTTCTGCGAG 000400 000401 ATGGTGCAGT TCCCCGGCGA CGTGAGGAGG CAGGCCCTCC TGCAGCTGTG TCTGCTCCTC TGCCACCGTT TCCCGCTGAT 000480 000481 CCGGAAGACC ACGGCCAGCC AGGTGTACGA GACATTGCTC ACCTACAGTG ACGTCGTGGG CGCGGATGTG CTGGACGAGG 000560 000561 TGGTGACTGT GCTCAGTGAC ACTGCGTGGG ACGCGGAGCT TGCAGTGGTG AGAGAGCAGC GCAACCGTCT GTGTGACCTT 000640 000641 CTGGGCGTAC CCAGGCCCCA GCTGGTGCCC CAGCCTGGTG CCTGCTGAAG CCAGTCCTGG AGCCCATACC TCACCCCTGC 000720 000721 CTGGTGAGGA TGTCTTGTTC CTGAGGGAGG CCGGTGTGGA AAGCCTCGCA CAGTGGTGCC TCCAGCTGTT GAAGGGTAGC 000800 000801 GCTGGCCCTT GGAGGCTGGC ACTAGCTGAC AGCTTTTCCT CTCTGCACCT GCGCTCTGGT GACTTGGGGT GGACGCCTCT 000880 000881 GCCTTCACTT GAACACAAAT GTGCTTCCTA TAAAATCATG TACCAAGAA |
Predicted Small Protein
Name | NONHSAT056758_smProtein_218:307 |
Length | 30 |
Molecular weight | 3118.6092 |
Aromaticity | 0.0344827586207 |
Instability index | 72.3689655172 |
Isoelectric point | 6.50469970703 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.0462285815228 |
Amino acid sequence | MAGRAALQEILCEASSLPTVTFQVRHSCV |
Secondary structure | LLHHHHHHHHHHHHLLLLLEEEEEEEELL |
PRMN | - |
PiMo | - |