NONHSAT057191
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT057191 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
494 nt |
Genomic location |
chr18+:8958116..8971570 |
Exon number |
3 |
Exons |
8958116..8958283,8971146..8971256,8971356..8971570 |
Genome context |
|
Sequence |
000001 GACCAGATCA TCATGACATG GCCTCCTAAA ACATCCTTTC GAGGGCAAAG GAGACAGAAG AAAGTGACCT CCTAGCAACT 000080
000081 GCCTGTGCAA AGAAGAGACT CAACAAAAGA AAAGACTTCT CTCATGAAGA CCCAAGAGCT TCAGGGTCAG AATGAGGATA 000160 000161 AGAATTTGat gtgcagggtt tgaatgaccc aagcctgcag agtcaactct actgcCCGTC CACACTTGTC TGCTGCTGTT 000240 000241 CCTCACCTCT CCAGTGAGCG TGGAGTTCCA TGGTCTCAGG TGACAGCCAT CACACCCACT CTGAATTTCC TGACAGGCAT 000320 000321 AATAGAATTG AAGACACAGT GGATAACGAC AGAGCCTCGT GTACTGCTAA CAGGTACAGA AGCCAAATAG CCACTCTAGG 000400 000401 GAGTTCTGGT TGTTGTTTTG Gttttgtttt gtttttaaga gatgaggtct cactctgtgg cccaggctgg agtgcagtgg 000480 000481 cacaatcata gctc |
Predicted Small Protein
Name | NONHSAT057191_smProtein_269:490 |
Length | 74 |
Molecular weight | 8003.6821 |
Aromaticity | 0.0821917808219 |
Instability index | 51.2945205479 |
Isoelectric point | 5.65484619141 |
Runs | 10 |
Runs residual | 0.00715863897481 |
Runs probability | 0.0201819466525 |
Amino acid sequence | MVSGDSHHTHSEFPDRHNRIEDTVDNDRASCTANRYRSQIATLGSSGCCFGFVLFLRDEV SLCGPGWSAVAQS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHEEEELLLLEEEEEEEEEELEE EELLLLEEEEEEL |
PRMN | - |
PiMo | - |