NONHSAT058328
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT058328 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
578 nt |
Genomic location |
chr18-:11902748..11908346 |
Exon number |
4 |
Exons |
11902748..11902855,11905737..11905952,11906202..11906308,11908200..11908346 |
Genome context |
|
Sequence |
000001 AAGTTGGCTG GGTGCGCGCC GGCTCCGGCT GCAGTTCCCG GGTCCCTCGG CCACCGAAGC CACCCTGCCC TGGTGAAAGG 000080
000081 GCTCCCGCAC CGCCCGGTGC TCCCCATCTG CCTGGCGTTG TGCGCAGAGC TGGAAAGCAT GGCTGTTATA AATGAATTCT 000160 000161 GATTTTGGGG AGCAGATGCC AACTTAGAGC CTCGTACCAA TCTCTCTGTC TTTAAAAGAT GAGGTGACTT GGTGATTTTC 000240 000241 CTGGAAAATT ATAGAAGCAC TGAGGTGGAC ACTGCGGGTT Gtgaggttca ggaggggtaa gtggctggca caaggtcaca 000320 000321 gagcAGCGCT GCCATTTGGC TACTTTCCAA TTCAGCATAG CTGCCCTCTC TGCTGGTGGT ATTCACAGCA TGCAAGATAA 000400 000401 AATACTCACC AAGGAACAAG TGGCTAACTC CTCACAGAGC TCTCACGGTT TCCTCTTTCC TGACAAAAAG GGAAGCTGGA 000480 000481 GGACTGCAGT TTTGCATCCT ATCCTGCCCT GAGCCTCACT TTGGGCTGTC AGCCAGCCTT GTCTCCAGCC TGCTCACCAC 000560 000561 TCACTGATGC TTTTTGCG |
Predicted Small Protein
Name | NONHSAT058328_smProtein_389:511 |
Length | 41 |
Molecular weight | 4493.1072 |
Aromaticity | 0.075 |
Instability index | 46.6125 |
Isoelectric point | 9.52301025391 |
Runs | 9 |
Runs residual | 0.0469758064516 |
Runs probability | 0.0476554986359 |
Amino acid sequence | MQDKILTKEQVANSSQSSHGFLFPDKKGSWRTAVLHPILP |
Secondary structure | LLLLEELHHHHLLLLLLLLLEEELLLLLLEEEEEELLLLL |
PRMN | - |
PiMo | - |