NONHSAT058447
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT058447 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1291 nt |
Genomic location |
chr18+:13542303..13543593 |
Exon number |
1 |
Exons |
13542303..13543593 |
Genome context |
|
Sequence |
000001 CAGTCTGGCG CCATCTCCCT CCTTGCCTGG AGTCTGATCT GTCCCGGCCC AGTGTCCTCC AGGACCCTGG CCCCTCATGC 000080
000081 CTCCGTGCTT GCGCGTGTGC CATTTCCTCT CTCCAGAGGA CCTTTCCTGC CTAGGACTCA TGATTGTCCC CTCCCTGGTA 000160 000161 AGCCATCCCC GACCTTCCAG GCAGAACCTG CTGGCTTCTC CTCAGCACTT TGCATGGATT TCTGTCACAG TCCTGGGTGC 000240 000241 ACTGTGTCGC CCTCTCTATG TGTCAGCCTC CCGTCCCCTA CCGTGGGCTC CTCCAGGGAG GTGTGGACAT TCATCCTCTT 000320 000321 CCAGGCAGCC CTCAGGAATC CAGGGAGAAG ATAAGGAGGC GGGGCGGGCG GAGGTGGGTG CTCCACACAC TCAGAACACT 000400 000401 TTCCTCTGCA CTTACTTCAT TCTGGTTTTT CTTTTGGGTC CTTGGTGTTT TTAAATAAAC CCTTTCCTGT AGTTTGCTCC 000480 000481 CCTTCCATGG AGGGCTGTTT CGAGCACAGA TCTGCTGGGT GTCTGTATTT ACAAAGAGAA GGGGCCACTC GTGTGTGAGC 000560 000561 AGCACCGAGG GACAGAGGTA CCTTGCCTGC TTGTGTCCCC TCCAAGTCCT TCTGATATTT TCCTTTCCAG CTGTTGCCTA 000640 000641 GTTTCCTGGT ATTAAGGAGA ATCAACTCTC TGGATAAACG TGGTAAATAT GGCCCATAGT CCCATCTTTT TACAGGCATT 000720 000721 TTTTACACCT GGAGCAGCCA GAGGACGCAT GCATGGCTCT TCGGAAGGTA ATTTAGGGAT CACCCATGTA AGTTTCCTAA 000800 000801 GGATTTCTTT AACATGGTTC TTCTGATTCA GTCCGGCCAA TTAAATCTAA ATCCACCCCT GAAAGCCATC TGGTGTGGAT 000880 000881 AACAAGCCCA CAAATGAGCA GTCAGCTTTT TGTGCCCTTT AGGGCCTGGG ACAACCACGG GATCTAAAAG GGGCTGGAAC 000960 000961 TAGAGGTCTT GAGCTCCTGT TCCTAAAATC ATCTTCATCC TATATCTGCA GCCTTCTCCT GCCACGGCAT GCACCCACAC 001040 001041 ATGCGAGCCT CCCGGGTACT GTCATCCTGA ATTCTGAGAC CATCCAGCAC TTCCTTTAGT TTTGCCCTGG TGCTGTTGAC 001120 001121 TTTTGTTTAC TGAAGAGTGT GCTGGAGGCA GGACAAGGGA CATGGAAGGC TGCAATTTAA GAGTCTAAAA GGTTTTAGAA 001200 001201 TCCTGAAGGA GGTTTAACAA GCTGAATTGA AGAATAATAC CTTTCTCAAC TGGAGAGAAT TTACATGATT GCATTATTGT 001280 001281 TAAAATTAAC A |
Predicted Small Protein
Name | NONHSAT058447_smProtein_257:457 |
Length | 67 |
Molecular weight | 7666.8953 |
Aromaticity | 0.136363636364 |
Instability index | 77.6 |
Isoelectric point | 11.5473022461 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0341250341251 |
Amino acid sequence | MCQPPVPYRGLLQGGVDIHPLPGSPQESREKIRRRGGRRWVLHTLRTLSSALTSFWFFFW VLGVFK |
Secondary structure | LLLLLLLLLLLLLLLLEELLLLLLLHHHHHHHHHHLLLEEEEEHHHHHHHHHHHHHHHHH EELEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHH HHHHLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTT TTTTii |