NONHSAT059915
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059915 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1490 nt |
Genomic location |
chr18-:73936239..73944636 |
Exon number |
3 |
Exons |
73936239..73936995,73940858..73940958,73944005..73944636 |
Genome context |
|
Sequence |
000001 GTTTTCCCAA ATCTTTGGGC TTCCTTAGCC CTGTAAGTGG ATCAAACAGC TGGGGAGTTT TCttttttaa tttttatttt 000080
000081 tatCACAGAT CATCTACCAT GAGCAATTTC TCTGGAAGTT GATGTGTCAA TGACTATCTC ATCTTTGTTG AAGTGAAGTT 000160 000161 TTTGGTCCTG AAGCTGGCTG ACTCTCAGCT TCCTGGACAG GCCCTTTTCT GGGCACACCG GGACATTGGG CATTTGTTGG 000240 000241 AGTTTTCCAA TGTCTGTAGC TCCAGGTGTT CAGCAAGAGG CATGGCACTG TGAAGTCACC ATAGTGTTTA CGGAGAAGCA 000320 000321 CAATAGGGGG CACCCTCCAT AAATCTGGTT GAGGGAAAAG CATTACAAGT TGGATGAAAT AAGAATACAA GAAACAGTAT 000400 000401 TTGTAGAGTG TATATGACTG TGTGTCAAGT GAAGGGAAGA CAGAAGAAAT GCTGTAAGTT ACTAAGAGGG AGAAATGACT 000480 000481 AAGGACTGCA GTTGTCATGG CAGGCTTCCT GAAGGTGGTG GATGTGGGCT GATGTCTGaa gaaagttacc atttactgag 000560 000561 atctcacagt gagccaggcc ctgttctaaa tattaatgtg gatattttgt ttaagtctca tcatttttca agagtgaaca 000640 000641 cttcagtggT CTGTagtccc tcagttgcac tggacacagt tgaggccctc aggagccacg cggggtcagc ggtggtggca 000720 000721 ttgggcagag cagagagggt aaactgacag atgggaaact gaggcctgga gagatttcgt ctcctgctca acattgtcac 000800 000801 aacttgtcag agatggagcc tgagcaaaat cccaggtctg cctgattctg aagcctggac ttttacagaa cactgcctct 000880 000881 GACCATGGCT ATGCTGGCAT TCAGCAAGTA GGAACATCAG GAGCACTGAG GCTGTCACTA ATGGTCCTGT CCCAGCCCCT 000960 000961 CCACTGTGAA GCTGAGACCT TTCACAGGAA CCAAAAAGGG ATTGATGCTG TGGAGATGGG ACACTGATAC TCGCAGGTAT 001040 001041 GCACACTGCT GGGCAGGTCC ACATGACCGA TACGTGCCAG AAGCCAACTG GAACAAAGCT GTGAAATGGG AGCATTTCtg 001120 001121 agaaagagaa tagcagcccc tccctggtgc cagcccagcc cacacagctg ggcctggcat tctccctaac acaacacatc 001200 001201 gctgaagagc aacaccagac aagccactca tgacccaatg cagcaagaca gacagacacc gggtgactgt gtctggacac 001280 001281 agaaaacatg ccatggtcta gccaccaaTC ACAGACACTG GGTGACCGTG TCTGGACACA TATGGGACAC ACCTCGGCCC 001360 001361 AACCACCGAA CGATTCCCTG TTATGCCTAC TAGGAATGAC AGCTGCTTCT TTACCTGCAT TTTCTTTAAG CACCTGTGCC 001440 001441 AGGTGGTTTC ACTCCTGAGC CTCCAGCATG GTGTGTCAGG AATACTTCTG |
Predicted Small Protein
Name | NONHSAT059915_smProtein_1004:1120 |
Length | 39 |
Molecular weight | 4830.3453 |
Aromaticity | 0.210526315789 |
Instability index | 49.4473684211 |
Isoelectric point | 7.98016357422 |
Runs | 7 |
Runs residual | 0.0115997229917 |
Runs probability | 0.0320867085574 |
Amino acid sequence | MLWRWDTDTRRYAHCWAGPHDRYVPEANWNKAVKWEHF |
Secondary structure | LLEEELLLLHHHHHLLLLLLLLLLLLLLHHHHHHHHLL |
PRMN | - |
PiMo | - |