NONHSAT059925
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059925 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
682 nt |
Genomic location |
chr18-:74070152..74071520 |
Exon number |
2 |
Exons |
74070152..74070563,74071251..74071520 |
Genome context |
|
Sequence |
000001 GTTTCCTGCT CATATCTCTT CCTCATTTTT GCGTTCAAAT AACACACAGC TAATGAGCTT CTAAAAATCT TTTCAGGTTG 000080
000081 TTCACTTGTA TTCCTTAATT TGAAGAATGA ATATTTAAAT TCTCTCAAAA GTCAGATATT GAGGATCTTC TCTGGGAAAT 000160 000161 TGGCCACTGT ACCTGCCCAC CTTTCTGCCT GGTTCCCTGG AAGGTCTTAT TGTCATCTTA GACGGACAGA TTTCATTCTC 000240 000241 AGCACCATAC AGATTTGGCT TCAAAGCCAG AACGTTTTGT TCACTGAGCA AAAAAACAGA TGAAACAACC ACAGGCCAGG 000320 000321 ACTTCAAGTG AGGAGGACGC CTTTGTTTGC CGTGGTTGGT GGGAGCACAC GCCGGAGCCC GGTAACGTGC CTGTGGGAGT 000400 000401 GACCAAGGGC CACCCGCCCA AGGGAAAATG TTCATTCTTC ATCAGCTTTG CTAATTCTGC TTTGAGGCAG TAAAATGCAA 000480 000481 AAGACCATAG AATTTGTATT TCTTTTTTTA AAATACAATT TATAACATTA TATTTTGTAC TCTTTATATT AGAATTTGTA 000560 000561 ACTAGATTGA TGTATTTAAC TATTTCTGAA AAAGTAATTC AATGTTTTAG TTGTGTGATA AAAATATTTA GATAAAACAT 000640 000641 ATTCATTCTA TTGGAATTTG AAATAAATAA AAACATCTTG GA |
Predicted Small Protein
Name | NONHSAT059925_smProtein_299:472 |
Length | 58 |
Molecular weight | 6330.0699 |
Aromaticity | 0.105263157895 |
Instability index | 48.4964912281 |
Isoelectric point | 8.80352783203 |
Runs | 11 |
Runs residual | 0.0390350877193 |
Runs probability | 0.0467472820414 |
Amino acid sequence | MKQPQARTSSEEDAFVCRGWWEHTPEPGNVPVGVTKGHPPKGKCSFFISFANSALRQ |
Secondary structure | LLLLLLLLLLHHHHHEELLLEEELLLLLLLLEEEELLLLLLLLEEEEEEEHHHHLLL |
PRMN | - |
PiMo | - |