NONHSAT060033
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT060033 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1169 nt |
Genomic location |
chr18-:77126617..77127846 |
Exon number |
2 |
Exons |
77126617..77127128,77127190..77127846 |
Genome context |
|
Sequence |
000001 tctttttgga atgcccttga tttcgacttg tctgatgtct tctactgatg acactactgg ggaggatttg ttgaggagac 000080
000081 acgtgtcccc tgcagggctc cacagcagga ggtgtggtgg cctctctcat ccctggtgat gggaactgtg accCTGGAGT 000160 000161 TCCACTTCCC TTGGAAGACC TCGTGACAGT GGCTGCTGCC TTGGTGCCCC AGCGGGGCCT CCAACTGCCC TGGTTCCTTC 000240 000241 ACCATTTATA ACTGGAATCC TCTGGTTGAG GAGGCGCTTT CTCTGCGTAC ACATGGTGGA GGTGAAGATA TCTGTGTGCT 000320 000321 CTCTGGTTGA GGAGGCACTT TCTCTGCGTA CACACAGTGC AGGTGAAGAT ATGTGTGCTC TCTGGTTGAG GAGGCACTTT 000400 000401 CTCTGCGTAC ACACGGTGGA GGTGAAGATA TGTGTGCTCT CTGGTTGAGG AGGCACTTTC TCTGCGTACA CACAGTGCAG 000480 000481 GTGAAGATAT GTGTGCTCTC TGGTTGAGGA GGCACTTTCT CTGCGTACAC ACGGTGGAGG TGAAGATATG TGTGCTCTCT 000560 000561 GGTTGAGGAG GCACTTTCTC TGCGTACACA CGGTGGAGGT GAAGATATGT GTGCTCTCTG GTTGAGGAGG CACTTTCTCT 000640 000641 GCATACACAC GGTGGAGGTG AAGATATGTG TGCTCTCTGG TTGAGGAGGC ACTTTCTCTG CGTACACACG GTGGAGGTGA 000720 000721 AGATATGTGT GCTCTCTGGT TGAGGAGGCA CTTTCTCTGC GTACACACGG TGGAGGTGAA GGTATCTGTG TGCTCTCTGG 000800 000801 TTATCATCTA GTCATGCTGC TGTCTAGGTT GCTGTGCAGG GTGTTCAGTG CTAGCCCGTG GGAGGCTCAG CCTCTGACGC 000880 000881 CGTCAGACCT GCCTCCCGCA CCAGCCTCAC TGAttcttgt tcagcagttc cttacttttt tgctccacaa gaagtttcag 000960 000961 gctcatcttg tatttccctt gcctcagccc tggaattaac cccttctcta gggctctgcg tggtggggga cggcacaggg 001040 001041 tctcgtccgc ataatctgca acactgagct tgctcactac cgcctggttc ctgattctag ccactcggtg tatggcctag 001120 001121 gactgtgtgt gtttactaag tcatgctcac acatgtccgt gtttatttc |
Predicted Small Protein
Name | NONHSAT060033_smProtein_488:565 |
Length | 26 |
Molecular weight | 2914.5824 |
Aromaticity | 0.08 |
Instability index | 44.584 |
Isoelectric point | 8.68402099609 |
Runs | 6 |
Runs residual | 0.0316981132075 |
Runs probability | 0.0244656421127 |
Amino acid sequence | MCALWLRRHFLCVHTVEVKICVLSG |
Secondary structure | LHHHHHHHHEEEELLEEEEEEEELL |
PRMN | - |
PiMo | - |