NONHSAT062811
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT062811 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1232 nt |
Genomic location |
chr19-:16756967..16770968 |
Exon number |
3 |
Exons |
16756967..16758072,16770206..16770258,16770896..16770968 |
Genome context |
|
Sequence |
000001 CCCTGGGGCT TCCGCTTCCG GTTCTGACGG ACGCTTCGGC CGTAACGATG ATCGGAGACA TCCTGCTGTT CGGGAAAAAG 000080
000081 AAGGACACGC AGGGCTTTGG GGAGGAGTCC AGGGAGCCCA GCACAGGCTG TTCGGCTCTT GAATCCCAGC GATGAAACCA 000160 000161 GGAACTCACT TTCCCGGGAT GCCGAGTCTC CATTCCTCCA TTCCTGATGA CTTCAAGAAT GTTTTTGACC AGAAAACCGA 000240 000241 CAACCTTCCC AGAAAGTCCA AGCTCGTGGT GGGTGGAAAA GTGTTCGCCG AGGTGTGCAT GGTTTCCCAG CCACGTCCCT 000320 000321 GTTTTCAAAG ATAGTTTCAC TTTGGTCTCT GAATTGAAAT GCTGTCTACT GAAAGGGTTT CAGGAGCGTT TATGTAAGGG 000400 000401 GCTGTGATGA AATTGCATTC CCCATAGATA AAAGAAAAAT CATTTCTATC CAGAGATCTG AGCAGAAGGA TTGGCTTGTT 000480 000481 AGTTTAACAC AGCCGTATTT TTGGACATTC AGTGTTACTT GCTGAGTCTG ACAGCCTCTG GGCCCGGCCA GGGGCCCTGT 000560 000561 TAACAAACTG CTTTCACATC CCAACAGGGT CTGCTTGGCC ACTCAGTGCA GCTGCGATTA ACCCTAAAGG CTTTAAGGAA 000640 000641 CGGGCCACCT GTAACAGAGA CACCAGCCTT CCTGTATAGA CACTAAATTG TTAGCAAGAG TGTTGAGCTA GTTCCTGGTG 000720 000721 AAGTGTTTCC ACAGAAGACA TGTGGAGCAG TTGTGGGGAT ATTAAGGGAA ACTTTCCTCT GCCTTGACCC CTTTGTTAAA 000800 000801 TAAAATGACT TTGGGAGCCA TTCATTGTAC AGTTGCAGGA ATGAGAGTGA TTTTATGATG TGGTACATTG GGACCATGTT 000880 000881 CTAAAACCTT GGGTTTCTGA GTCTGCTTTT TGAGTAGGTG ATTTTGAGGT TGAAAAACCA GGGGCCTTCA TCTAGGAAAT 000960 000961 ACAGCATTTT CCAGAAGCTT CTTTGAAAGG GAATCCTGGT TTTGTTGCCA AAATGAAACG CCCGGGGTTG GCGCTGAATC 001040 001041 CCACAACTGT GTGAtttgct tgttgagttt tttgttgtct ggtttttttg tttgtttgtt tatACCAATA AGAATGAGCC 001120 001121 TGAATGTTGG TGGTTTTTGA AATCCTGACT TGGAGGTAAA CCTGGAGGAA GGAAAAAAAG TAAATATGCA GGCTTTTAGG 001200 001201 ACTGAGTAGC CTTGAAAATA AACCTCATTT CT |
Predicted Small Protein
Name | NONHSAT062811_smProtein_206:406 |
Length | 67 |
Molecular weight | 7687.0196 |
Aromaticity | 0.136363636364 |
Instability index | 54.1727272727 |
Isoelectric point | 9.22589111328 |
Runs | 12 |
Runs residual | 0.0312103066594 |
Runs probability | 0.0257389742684 |
Amino acid sequence | MTSRMFLTRKPTTFPESPSSWWVEKCSPRCAWFPSHVPVFKDSFTLVSELKCCLLKGFQE RLCKGL |
Secondary structure | LLLEEEEELLLLLLLLLLLLLEEEELLLLEEELLLLLLEELLLLEEHHHHHHHHHHHHHH HHHLLL |
PRMN | - |
PiMo | - |