NONHSAT063649
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT063649 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1004 nt |
Genomic location |
chr19-:20451177..20607765 |
Exon number |
3 |
Exons |
20451177..20451910,20519759..20519854,20607592..20607765 |
Genome context |
|
Sequence |
000001 GACGGCTTTC TGGTATGGCG CGGCCTTTGT CTCTTGCTGC CGCTGGAGCT CCAGATCTCT TGTTCACTGC TCTGTGTTCT 000080
000081 CTGCTCATAG AGGCCCAGCC TCTGAGGCCC TTTGACCTGC AGGTATTGGG AGATCCACAG CCAAGAGCCA GGACCCCCTA 000160 000161 GAAGTCTAGA AATGGTATTG TTCTCTCCAA GCCAGAACTG ATCACCTGTC TGGAGCAAGG AAAAAAACCT CTGACCGTGA 000240 000241 AGAGACATGA GATGATTGCC AAACCCCCAG ATGGAATTAA attcacctgt ctcggccttc caaaatgctg ggataacagg 000320 000321 catgagccac cgcacccagc cCAGTTATTT CAACAAGTGC Atgctcaaga gtgtgttgta tcatttctat atagctgtaa 000400 000401 atttatcaat tatttatatt attgttttat actctaattc cattttttgt cgtagaaggt aatctatgaa atttcggttt 000480 000481 taaaaaatgt gttaagtctt tgtttttggc ctatcaggtg gtttataaag aagaatgttg aatgagctat tgagaaggct 000560 000561 gtgtatcccg atgttgttga ggagtgttct ctataccttc attagaaatt attgtttttg actgcctttt agtcctctgt 000640 000641 tcccttacta atatcatctt gttttattat tattacagaa agtggggtat tgaaatatcc tactataatt atattgctct 000720 000721 ctctgtgttt attcagtttt gttagtattt actttatata tctgaaagcc taatttgaga cacacacaca aatacatgca 000800 000801 tgtataaaca aatttgtcat acattcacag ggaatgaatc tatgtattgt taaatgtcct tttttgtctg tttgaagttt 000880 000881 tgacttaaag tacattttat aaaatatgac agttttttac ttaagatgta gcttgtgtaa tattattttg agctcttctg 000960 000961 ctctaatttg gttaatattt acattaaatt tctacttcca tctc |
Predicted Small Protein
Name | NONHSAT063649_smProtein_251:436 |
Length | 62 |
Molecular weight | 7163.3701 |
Aromaticity | 0.16393442623 |
Instability index | 51.662295082 |
Isoelectric point | 7.64825439453 |
Runs | 11 |
Runs residual | 0.0275108347466 |
Runs probability | 0.0275649981532 |
Amino acid sequence | MIAKPPDGIKFTCLGLPKCWDNRHEPPHPAQLFQQVHAQECVVSFLYSCKFINYLYYCFI L |
Secondary structure | LLLLLLLLEEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHEELEEHHHHHHHLLLEE L |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH H |
PiMo | i??????????????????????????????????????????????????????????? ? |