NONHSAT065830
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT065830 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
595 nt |
Genomic location |
chr19+:35870421..35872278 |
Exon number |
2 |
Exons |
35870421..35870690,35871954..35872278 |
Genome context |
|
Sequence |
000001 CCTGTGGAGT CACTCAAACA CACACAATGC CCACATGAAG ATGGGGATAT GCGGTCTTGG ATGCCTAATT TACTACTTAA 000080
000081 AATTAACACA CACAATTAGA TGATTCCCTT TTCCCTCCCC TCCCCttttt tttttttttt tgtttctttt tttttttttc 000160 000161 tgtgacaggg tctggctctg tcacccaggc tggagtgcag ttacgcaatc atggctgact gcagcctcaa cttctcaggc 000240 000241 tcaagcaatc ctcccgcctc agcctcccaa GCAGTTGACA AGAACGTCGG AAGATGTTCT TCCTCATCCC TCGTTCTTAT 000320 000321 TTTGCAGTCC CTCCCTGCCC CTACAGCTGT TCTCTGAAAG CTGTCACCCT CATCCACAAA AAGATCTTGG AGGCCACAGG 000400 000401 CAAGGCAGGG AGGGAAGCTC CGAGGACTGA TGctggctct ccttccttct cctcccaact ccccctccca actggcactg 000480 000481 aaggcaggtg ttcctcaggc tcggaccctg cctgcctttg ttcgttttct ctctcctgtc tgcaggcatt ctgatccatc 000560 000561 acaatggctg ttaacattca tgactcccac atctc |
Predicted Small Protein
Name | NONHSAT065830_smProtein_293:553 |
Length | 87 |
Molecular weight | 9104.4498 |
Aromaticity | 0.093023255814 |
Instability index | 64.4895348837 |
Isoelectric point | 8.62542724609 |
Runs | 12 |
Runs residual | 8.67754251998e-05 |
Runs probability | 0.0204027556969 |
Amino acid sequence | MFFLIPRSYFAVPPCPYSCSLKAVTLIHKKILEATGKAGREAPRTDAGSPSFSSQLPLPT GTEGRCSSGSDPACLCSFSLSCLQAF |
Secondary structure | LEEEELLEEELLLLLLLLLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLHHHHEEELHHHHHLL |
PRMN | - |
PiMo | - |