NONHSAT066208
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066208 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
737 nt |
Genomic location |
chr19+:38837124..38840269 |
Exon number |
2 |
Exons |
38837124..38837245,38839655..38840269 |
Genome context |
|
Sequence |
000001 TCTCATCGAG GCCCTTGTGG CACACTGTGG ACCAGTCACC TGTGCTTATC CTGGGAGGCA TTCCCAATGA GAAGTACGTC 000080
000081 CTGATGACTG ACACCAGCTT CAAGGACTTC TCTCTCGTGG AGacaggtaa tgggccgaca ccataacaag gcttgaggga 000160 000161 gacacatctc agatgacggt gaaaacccaa tcgccacacg tagaaactac aagaagatcC TATGATCCTG ttttagttct 000240 000241 ttttcttttt tttctttttg tcatggtctc actttcttac ccaggctgga gttcagtgat gcaatcttgg ctcactgcag 000320 000321 cctccatctc ctgggttcaa gccatcctcc tacctgagcc tccctagtag ctgggactac aggcgcatat caccatgcct 000400 000401 ggctaatttt tgtatttttg gtaaagatgg ggttttgcca tgttgcccag cttggtcttg aactcctgac ctcaagccat 000480 000481 cctcctgcgt tggcctccca aagtgctgtg attacaggca tgagccaccg tgcccagccT TGTTCTTGTT CTCTAACCAA 000560 000561 GGAGATTTCT CCCTGATGGC CTCATCTGTT TGTCTCCTCT CTTCCCTGCT CCTGTCTCTC TCCACCACTC CCTTCCACAC 000640 000641 TGCCCCCAGG AAACGAATCC TCCCCTGGCT CATGGTTGGG GTCCAGGTAT AGATGCTGTA ACAAAGAGAC CCTGGAAGGG 000720 000721 AATTACTTAA ACAGAGA |
Predicted Small Protein
Name | NONHSAT066208_smProtein_575:691 |
Length | 39 |
Molecular weight | 4154.0167 |
Aromaticity | 0.0526315789474 |
Instability index | 51.3447368421 |
Isoelectric point | 10.8599243164 |
Runs | 7 |
Runs residual | 0.0115997229917 |
Runs probability | 0.0145229262876 |
Amino acid sequence | MASSVCLLSSLLLSLSTTPFHTAPRKRILPWLMVGVQV |
Secondary structure | LLHHHHHHHHHHHHLLLLLLLLLLLLLLLHHHHLLEEL |
PRMN | - |
PiMo | - |