NONHSAT066579
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066579 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
580 nt |
Genomic location |
chr19-:43540021..43545400 |
Exon number |
3 |
Exons |
43540021..43540112,43544526..43544780,43545168..43545400 |
Genome context |
|
Sequence |
000001 AGCAACCCCG TGGAGGATGA GGAGGCTGTG GTCTTAACCT GTGAACCTGA GATTCATGGC ACAATCTACA TGTGGTGGGT 000080
000081 AAATGGTCAT AGACTCACAG TCATTTCCAG GCTGCAGATG TCCAATGACA ACAGGGTCCT TGCTCTACTC GGAGTGACAC 000160 000161 AGGACTCTAT GAATGTCAAA GCAAGAATGT AGTGAGTACC AGCCAAATTG ACCCAGTCAC CTGGATGTTC TCTATGGCCC 000240 000241 AGATGAACCC ACAACTTATT CTTCAGACAC CTATTACTAT CCAGGGTCAA ACCTCAACCT CTCCTGCCTC ATGGGCTCTA 000320 000321 ACCCATCAGC AGAGTATTCT TGGCTGCTGA ATGGGAATAA CCAGCAAACA GGACAAGAGC TCTTTATCCC CCTAGTCACT 000400 000401 ACAGAGAATA GTGGGGACTA TCTGTGTTAT GTCCATAACC CAGTCACTAA TGGCAAAAAC TTCGCAACCA AGAAAATCAC 000480 000481 AGTCCCTGAT ACTTCAGTGA AAGGAAGTTG TCCTGGCCTT TCAGGTAGAG CCACTGTCAG CATCATGATT GGAGTACTGG 000560 000561 CCAGTGTGGC TCTGATCTAC |
Predicted Small Protein
Name | NONHSAT066579_smProtein_224:349 |
Length | 42 |
Molecular weight | 4461.1249 |
Aromaticity | 0.0487804878049 |
Instability index | 61.2707317073 |
Isoelectric point | 6.48773193359 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0462311050546 |
Amino acid sequence | MFSMAQMNPQLILQTPITIQGQTSTSPASWALTHQQSILGC |
Secondary structure | LLLLLLLLHHHHLLLLEEELLLLLLLHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |