NONHSAT066648
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066648 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
589 nt |
Genomic location |
chr19+:44488371..44493095 |
Exon number |
2 |
Exons |
44488371..44488474,44492611..44493095 |
Genome context |
|
Sequence |
000001 GCTACTTAAC AAGGTGGTTT GAGCCAAGTA TGTGTCTTGC GGGTCTTTGC GAAAGTGAAC CAGTTATTAG GGGCGCCTAA 000080
000081 CGACCTGGGG GGTCAACTAA GGGGACTGTG GCACGTTTCA GGCAGGATTC CTCCTTCATT CAAACTGCAT CACCCAGGAG 000160 000161 TCTGCAAATT CCCCAAAGTA GGAGGAAAAA TGACCACATT CAAGGTGAGG GGGGCGTGCC TCTCTCGCTG TTAAAATTCC 000240 000241 ATGTCACTAC TCATATTTTC ATGTGTTTTT CTCTGTCATG AGAAGACTCA AGGGGAAAAC AGGCATTTGG GGACCTGTTT 000320 000321 GTGCCAGGTG CTTCCTTTAT CTCTTTTGTG TTGACTGCAT TTGGTTtttg gttttgcttt gttttgtttt gttACCATTA 000400 000401 TTTATTTTAT GGAGTATGAA AATTAGTAGA AATGAACAGT GCTCCCACTT CCTTACCTCC CCTCTCTCAA ATTATCTGTT 000480 000481 TTTATCTTCT CTGCTGTTCG TCATGTACAT TTGTAACTGT ATTTGTATTG ATGATATACA TCTAATTGTA AACTGTGCTC 000560 000561 TTTTTATATG TTATATAATC TTCCATTTT |
Predicted Small Protein
Name | NONHSAT066648_smProtein_431:544 |
Length | 38 |
Molecular weight | 4120.0116 |
Aromaticity | 0.135135135135 |
Instability index | 63.23 |
Isoelectric point | 5.26568603516 |
Runs | 6 |
Runs residual | 0.017604760724 |
Runs probability | 0.0652269916976 |
Amino acid sequence | MNSAPTSLPPLSQIICFYLLCCSSCTFVTVFVLMIYI |
Secondary structure | LLLLLLLLLLHHHHEEEEEEELLLLEEEEEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLL |
PiMo | oooooooooooooooTTTTTTTTTTTTTTTTTTTiii |