NONHSAT066796
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066796 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
1385 nt |
Genomic location |
chr19+:46144443..46145939 |
Exon number |
2 |
Exons |
46144443..46145024,46145137..46145939 |
Genome context |
|
Sequence |
000001 CTGGTCTCAG CCTCTGTTAC TCCGTACCCC AGATTTTAAT TTCGCCCAGG CGAACACTGT GGCTGCACCC TTAAATTCCT 000080
000081 CAGACTCCCT CTTTCCTTGT AGAAACTCTG TGGCTGCTGC CTTGACTTCA TCCCTGAAAC TCAACGGGGC CTCTCCTGTA 000160 000161 CCTTAATAAC CACGCCCATA AGCCAAGCTC CTCCCTGACT TCCTCACCCA GTAGACCTGA CCGTCCAGCT TCTAAAAACT 000240 000241 CTGGCCACGC CCCTCAATAT TGACTCCGCC CTCCCAGACC TTCCACTGTT ACCGTGCCAC CTCAAGATTG GTCCCTCCAA 000320 000321 GGCTCTGGCA CCGTCCCCGC TTTTGAACTA GCTGGCCCCA CTCTAGGTTA CGACCTCGTG GCCTGGGGCA TGACTACATT 000400 000401 TCTCGACCAT TTCCTCCCTA TCTCTTTCTG CGGCTTGACG CCGCCCCAGT CCTTACCCTT CCTTTTTGGC GCTACAGTTG 000480 000481 CTGCTGGAGG ATGTGGTCCG GCTGCGGGGG TCCTCACGGC GCACCGAGGC GAGGCGCTCT GGTGACAAGT AGCGGCGGAC 000560 000561 ACTGCTAAAA GAGAGCACAC AGGTCTTGGA AGAGGCTGGG GGTCCCGGCC TTGTGCCTTA CCTGCGCCCG GAGGTCGCCT 000640 000641 CCTTCTTGGG AGAGGATGGG GACGTGGCAT AGCCACCCAC GCGCCGCGGG GGTCCCGAGC CATTAAGGGG CGTCCTGGTG 000720 000721 GGAAGGCCTT TCAAGAGCTG ACACACTGGA GGGATGGGGT TAGGGGACAG AAGAGGGTGA GTATAAGGAC CAGGCCCCGG 000800 000801 TCCTCCCCAT CCCACCCCTC CAGTCTAACG GGGATACCCG AGGCAGTGGT GCCTAAGCGC GGAGGCGCCC GGCCCTTGGG 000880 000881 GGTGCCCCGC GCGCGTAGCG CCGCTCCCTG TTCTTCGCAT GCCCGCAGGC GACGCAGAGC ATCCGCCAGC GCCGCCTTTA 000960 000961 GGACCGCCAG CTCGTCTTCC TGTAACTGCA GCCGCTGCTC CAGCGCCGAC ACGCGGTCGT CCACTTCCAT ACCGCTCGTG 001040 001041 CCCGACAAAT TGTCATCTGG AAGACGGGGG AGTGCCGGCT GCAGGGCCAC CCAGGAGCTC CAGTGCCCAA GGGGTCCCTC 001120 001121 CCGCCTTCCT GGGTCTAAGC GGGGGGCCAG CCACGCCCCT TTCCTGTCCC GCTACCTGGG GCTGGGACAC TTGGACATGA 001200 001201 GCCAAGGAAG AGGACTCTGA AGGGGGAAGG AAATCCCCAC AGCTCTCCAA CCCATCCGCA CACTCCTctc tgccacagcg 001280 001281 cgctggccgt gtgaccttgg ggaagtccct tccctctTAT TTTCTAAGAG TCTGTGAACC CAGGAGCCTC TCGCTCTGGC 001360 001361 TTTAAGATGC TATGACTAAG ACGTg |
Predicted Small Protein
Name | NONHSAT066796_smProtein_389:544 |
Length | 52 |
Molecular weight | 5246.0482 |
Aromaticity | 0.117647058824 |
Instability index | 41.4901960784 |
Isoelectric point | 5.94854736328 |
Runs | 6 |
Runs residual | 0.0365948359542 |
Runs probability | 0.0653005947122 |
Amino acid sequence | MTTFLDHFLPISFCGLTPPQSLPFLFGATVAAGGCGPAAGVLTAHRGEALW |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHEELLLLLLLLLEELLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii |