NONHSAT067006
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067006 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1467 nt |
Genomic location |
chr19+:48323801..48325267 |
Exon number |
1 |
Exons |
48323801..48325267 |
Genome context |
|
Sequence |
000001 gggaaaaaga gaaggaggaa cagagaTTGG AGCTGCagag gataagcgag gacagaggga cagagatgag gctggagtta 000080
000081 cagggacagg tggacaggca gaaagacagc aaagggaggg acagacagac aggaacagaa ggacatggag gctgagggag 000160 000161 aggggagaaa gagcaagata gacagggaga cacagagaaa aagaataaga gagaCCAAGG GGATAATGCA GGTTTATCAA 000240 000241 CAGAGACAGG GACGGAGAGG AGCAGATGGA GAATGAAAGA GTGGTATTCA GGAAAGTAGG CAGAAATGCC ACAGCCTAAG 000320 000321 GCCCACAGGA AAAGAAACTG AGGTACAGAG AAGCCAGACA AAGACCAATG GTGTGTAGAG AGATGGTGAG Tgctgggttt 000400 000401 gttggctcac gcctgcaatc ccagcacttt gggaggccga ggtgggagga ttgcttgagg ccaggagttt gaagccagcc 000480 000481 tgggcaacat agagcgactc catctctacg aaaataaaaa aattagctgg gcatcgtggt atgtgcctgt aaagtctcag 000560 000561 ctactgggga ggctgaggag ggaggatccc ttgagcacag gaggtcaagg ctgcagtgag ctgtgatcat gccactgcac 000640 000641 tccagcctgg gcgacagagt gagaccctgt ctcaaccaaa aaaaaaaaaa aggaaaaaaa aaagaaaaaa aTCCCAAACC 000720 000721 CCAAACTCCA CCAAAAACAG AAAAACAAAA CACCCTTTCT AATAAGTCTG CCTATTTTCA GTGCTGGAAG CAGCCCCTGC 000800 000801 CACCTCCGCC CCCAAAAAGA GGAGAATATC ATGTCTGACA ACACAGAGAC AGAGAGGCCA CAGACAAGAC TTGACCAAGT 000880 000881 CAAAGAGAGA GAAACAGGGG AAACTGAGGC AGAAACCGAG ACCAATGAGG CACTACAGAG ATAAACTAGC TGTCGGACAG 000960 000961 ACTGTTGTGG AGAGAAAGGG GGACCCAGGA GAGGGATCCC GAAAGCTCCG TGCCTCTCTT TTTTCAGACG ATCTCTCAGG 001040 001041 ACCATCTGAC AGTGCTCTCC TTCCTCTTTG ATGCCTCTCT CTTGGGATAC TAGCTGAAGC TGGAGAGACA CCAGTTAGAC 001120 001121 CTAAGGAAGG ACTTCCCTGA GGAGTAGGGG CTTATGGTCA CCGGCAGGAG CTGGGGCCTC CCTTCCCCAT CAGCCCTAAT 001200 001201 TGCCAAGATG TCATGGGGGG AAGAGGAGGG GATTAAGCAG ACGGGTGCCC CTCCCCCTCC CAGCCAATGT CACCTCCTGG 001280 001281 TGCCCAGTCG AGTCCCCCAC CTTGGCCGGG ATTACCCTCC GAGTTCCAGG CCATGACAAA TGACATCACT CCCGGCCCAG 001360 001361 GCTTAAAATC TCCCCATGTG AGGGGATGTG TTTCCTTCAG CCTCTGCTGT CTGGCCGCTC TGTCTAGGTC CTGGGCCACG 001440 001441 GGAGAGCCCC GTCCCTCCTT TCTGAAG |
Predicted Small Protein
Name | NONHSAT067006_smProtein_830:943 |
Length | 38 |
Molecular weight | 4323.4931 |
Aromaticity | 0.0 |
Instability index | 48.1432432432 |
Isoelectric point | 4.32159423828 |
Runs | 8 |
Runs residual | 0.03644929333 |
Runs probability | 0.0328011835365 |
Amino acid sequence | MSDNTETERPQTRLDQVKERETGETEAETETNEALQR |
Secondary structure | LLLLLLLLLLLLLHHHHEELLLLLLEEELLHHHHHLL |
PRMN | - |
PiMo | - |