NONHSAT067413
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067413 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1852 nt |
Genomic location |
chr19-:51656180..51685222 |
Exon number |
5 |
Exons |
51656180..51657213,51657501..51657555,51659603..51659730,51668478..51668530,51684730..51685222 |
Genome context |
|
Sequence |
000001 GGGCCCAGGG CGACAGCGGA GCCTTCACAC CGCTTTCTCC GCGCGCTGAT GGAGGATTCC TGGCCTCACA GCAGTGCCTG 000080
000081 GCCTGTGGGC GTCCCCGGCA GTCCTCGGCT GCGGGACCTG TATCGGGACT GCGCAAAGTG GGCTTCCAGG AGAGCAGGGC 000160 000161 GTCCCTCAGT CAGCTGACCC CTTGGAGCGT GGGGCAGCCC AGGCCCGTGA GGCCGCCAGT GTCACCCTCA GGCCCGCGAG 000240 000241 GCCCCCGAGC CCCTTGTGGG GTCCAAGGCC CATTCTGGAT CAGTCACGAG GCAAGACCGC GGACCCTCAG GAGATCACCA 000320 000321 GGAGCCCGCC GCGCATTCCT CCGCCTCCAC CACGCCAGTC ACCTGCTCAG CCCGAGGGCA GCCAGCGGCC GTCGCCCCAG 000400 000401 TGAGGCGGCC GGTGAGGAGC TGAGGCCGTG ACCAGGGCAG CGCCCCGCGA GTCAGCGTCA GTCCCCGCGC CAGCCAGTTC 000480 000481 CTCAGACAAT CAGCTCACCA TTCCCATCGC GTATGCTGGG AAATCATCAA TATACCCGCT GTCATGCCCT TCAGCTGCCT 000560 000561 ACTGGGGCAA GTTCACAACC CAGCAAGATC CTCACAAATT CTCGGACAGC TCTTGGAAAT CTAATCTACT GAGCTTATAA 000640 000641 ATACATCAAC ACTTAGATTC TTCCAGTGTT CCAGGGCAAA TCAGGCTGCA TGTCCTCAGA CCCGAGGACA AGACCAGAGG 000720 000721 GGCAAGCAGC TCCTGTGTGT CCAGGTTCTC GGATTCCTTC ACCAGAGGCC ATGGAGTCAA CGGAGATGCT GCAAACTTAT 000800 000801 GGCTAAGGGG TGCCCAGTCA GTGGTTGCTT CACTCAGTGC TGGGTGCCGG GTGAGAGAAG AGACCTCAGA ATCAGGCAGG 000880 000881 GATTAAATTC CAGTCCTGCC CTGAGTACCT GAGCGACCTG AACGCAGCCC CCGTGAGGCT CCCGCACCTC GATGCACCAT 000960 000961 GGAACGATCA AGTCAGCATG ATTAGCACAT CCATCAGCTC AAATTTTTAT CTTTTTTTTT TTTTTTTTGG TGACAACATT 001040 001041 TAAACTCCTC TCTTTTAGCT ATTTTGAATT ATTCAGTACA TTACTCTGTC ATTGGAAACA ACACAGATGA ACTTAGAGGA 001120 001121 TGTTATGTTG AGTGAAATAA GCCAGGCACA GAGAGACAAA CACGTTACAA TCTCACTATA TTCGGAATCT AAAGTAGTCA 001200 001201 TCCTTAGAGA AGTACAGAGG AGAATGGTGG GTACCAGAGG CCAGGGCGGG GAGTGTGGAC CGATTGGATG GGGAAAGGGA 001280 001281 GAGTTTGGTC ATCAGGCATG CATTTTCAGT TAGACAAGAG GAATAAGTTC TGATGTCTTG TTGCACAGCA TTGAGGGCTG 001360 001361 CTAATTCTAC TGGAATCAGC CTCAGACTCC TTTGCTGGAG GGGTCGTGAA CCCTCAAACA AGCCCGAGCC TCTGCATTTT 001440 001441 CTTACTTGGG GATCTTGATC TCTGAGTACT CATTGTTGGT GGCTTCTTGT CCTGATAGGT CCTGAGGCTC CCCCTTATGA 001520 001521 AAGCTGAGGG GTGCATACTG GATCTCTCTT TCCTCCCCTG AGGAGTGGGC AGCCAGGCCA TGGTGTCGGG GGTTATCATC 001600 001601 TGCCCAGGAC TCAGTCAGGT TACCCTGAAT GGAGAGAGAG AAGAGAGTCA GAGCAGAGCA GTGGAAATAG GATAAGGCAG 001680 001681 GGAGAGTCAC AAGTTGTTTG ATCGGTTGGT TGGTTCGGAT ATATTCCTCT GTATAGAATT AAACTTCATG AGTTCCTGCC 001760 001761 TCTAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 001840 001841 AAAAAAAAAA AA |
Predicted Small Protein
Name | NONHSAT067413_smProtein_1106:1312 |
Length | 69 |
Molecular weight | 7551.5599 |
Aromaticity | 0.0588235294118 |
Instability index | 43.7573529412 |
Isoelectric point | 6.71038818359 |
Runs | 10 |
Runs residual | 0.00655802861685 |
Runs probability | 0.0488076311606 |
Amino acid sequence | MNLEDVMLSEISQAQRDKHVTISLYSESKVVILREVQRRMVGTRGQGGECGPIGWGKGEF GHQACIFS |
Secondary structure | LLHHHHHHHHHHHHHHLLLEEEEEEELLLEEEEEHHHHHHLLLLLLLLLLLLLLLLLLLL LLEEEEEL |
PRMN | - |
PiMo | - |