NONHSAT067544
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT067544 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1855 nt |
Genomic location |
chr19-:52897580..52901010 |
Exon number |
3 |
Exons |
52897580..52899003,52899618..52899752,52900715..52901010 |
Genome context |
|
Sequence |
000001 GGGCCGGGAC AAAGCCTGGG CCGGGCCTGC GCTTCCGTTC GCTTGACTGG CTGCGCTTGT TTTCAGGGTT TTGGTCTGAA 000080
000081 AACGGATCTT ACCTGCGCAG AGCAAAATCG GTTGTAGATT ATATCCACGA AAATTCCTTC TATTAAAATG AATTTCAAGT 000160 000161 CCCACCTACC CTGGAAGCAG AAAGAGAGAG AAGAGAGAGA GTAAAGAGAA AGAGAAAAGA AAGAGAAGTT GAAAAAGAGA 000240 000241 AAGAAAACCA AGAAAGAAAG AGAAAAAAAC CGAAAATAAA TGGACAAGAA AGAAAAGTCA CTGGGATCCT GGACTACGGC 000320 000321 ACTGCTCCAG GCAGGCCTGG TTATCCTGCT TGAGGCAGCA ATCCTCTTGA GCCTAGTGAA ATGCAACTGG CTGTACCTCA 000400 000401 ATGATGTTGC CCTGAGATTC TGCCAGTCGA GGCCAACGTG CCATGCATCC CTGGAGCATG AAACCCAGGA TGGGCCGCCT 000480 000481 TCCAGCCTCC CACAGCTGTG ATGCAAGTTG AACACATACA GAGAGACTGC ATCTGCACTG GGTGGTTTTC CTGAGCCTTG 000560 000561 GGGAGCAGAA TGCATGAATC CCAGGTATCT GCCGATCTGT ATGTAACAAA TTCACTTCAT GTAACTTACT GTGTGTCCGT 000640 000641 GAGATTATCT CTCACTCAAC TCAGACACAT TGGCAACCAG TGTGCAGTGA ACCTGCTTCA CAAGCAAGGA TGTGGAGAAA 000720 000721 CTATTTTCGT ACATTTTGTG GGAATCTGAA ATACTGCGGT CAGTATGGAA AGCAGTATCA TGGGAAACTT CCTCAACTCA 000800 000801 AGATCACCTA CCAATCCTTA CAGAATCAGA ATCATCATAC AAACTGGTGA AAGCATAGTT TCCCCTAGAG GTTGGGATGA 000880 000881 GGGCAAGAAT GTCCCCTCTT ATCACTACTA TTCCACACAA TATGAAAGGT TCCAGCCAGT GAAATAAAGG AAAAAGAAAT 000960 000961 AAAAGTGACA GGCTGGGTGT GGTGTCTGAG GCCTGTAATC ACAGTGCTTT GGGAGGCTGA GGAAGGAGGG TGGCCTGAGG 001040 001041 ACAGGACAAA AAAAATAGTG TACCAACAGA AAATATGTTG GTTGTGCAGG CTAATACCTT TCCCAAAGGA AGGTAGCTAC 001120 001121 ATCCCTATGA CCTGTGTTAC TGGATATATC AAAAGGGAGT TTGCAAATGT GGTCTAGATA AGGATCTTTA GATAGACATC 001200 001201 CTGAATTATA TGGTCAAAGT GATAGAATCA CAAGGTTCAA TATCAGAAGG GTGCAGGTGG ATGCGAAGGG ACAGAGACAG 001280 001281 TGGTGATGTG TTGAAAATAG AGGGATAAAG AGATTTTTTT TCTCACCTTT AAAGATGGAG GAAGTGGACC ATGAGTCAAA 001360 001361 GGATGTAAGT GGCCTCTGGA ACCTACAAAG GGTAAGGAAA CAAATTCTCC CCTGGAGATT AATGAAGAAT CACAGAACTA 001440 001441 TGGACCCATA TTAGATATGT GACTTACAGA ATTATAAAAG AATAAATTTT TCTTGTTTTA AGCCAATCAC TGTGTATAGC 001520 001521 AATAGGAAAC TGATGAAATG ATTTTATGTA GAAAATTCCA AAAAAATCTA CAAAAATCTC TAGAACAAGA AAAATGTAAA 001600 001601 GGTAGCAAAG TATAAGGTCA ACCTACAAAA ATATCGTATA TTTCATCAGC CAGGCATGGT GGCTCGTGCC TGTAATCCCA 001680 001681 GCACTTTGGG AGGCCAAGGC AGGCAGATCA CTCAAGCTCA GGAGTTTGAG ACCAGGCTGG GTAACATGGT GAAACCCCAT 001760 001761 CTCTACAAAA CACAAAAATT TAACAGGCCA TGGTGGCACA TGCCTGCAGT GCCAGCTACT GGGGAAGCTG AGGTGGGAGG 001840 001841 ATGACTTAAG CCTGC |
Predicted Small Protein
Name | NONHSAT067544_smProtein_1655:1843 |
Length | 63 |
Molecular weight | 6880.7886 |
Aromaticity | 0.0806451612903 |
Instability index | 43.1919354839 |
Isoelectric point | 9.62127685547 |
Runs | 9 |
Runs residual | 0.00847926267281 |
Runs probability | 0.0402265010108 |
Amino acid sequence | MVARACNPSTLGGQGRQITQAQEFETRLGNMVKPHLYKTQKFNRPWWHMPAVPATGEAEV GG |
Secondary structure | LEEEEELLLLLLLLLLEELHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEE LL |
PRMN | - |
PiMo | - |