NONHSAT067911
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067911 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
716 nt |
Genomic location |
chr19+:54929436..54930710 |
Exon number |
3 |
Exons |
54929436..54929886,54930302..54930480,54930625..54930710 |
Genome context |
|
Sequence |
000001 ACGTTTCCGC GGCCTGCCTG TCTTCCGGGC CTTGGCTCTC TCCGCCTCTC TGTCCTTGTG TGTCTCTCCC GTCTCCATAG 000080
000081 TGTtctcacg ctctctctcc cttactctgc tcttcctctc tgatttgatc ccttttgctc tctgcctttt tctgactcat 000160 000161 gcccgaacct tgtcttatct ttgtctcttt ttttggttgt gtctttctgc ctgtgcctcc ctccatctct ctctctctct 000240 000241 ctttctgttc tgtcttcact ctTCCAGTTT CCATTTCTGA GTCTTGCATA CACACACACA CACACGTTGC CACACAGCCC 000320 000321 CTCGTCCCGT CCCTGGGTGA CAAGCTCAGG CGCTGTGGGG TGTAGCGCTC AGCAGCAGGG GAGACAGTGA GCAGGGAGGA 000400 000401 GAGGGGGAGG AAGCACGCCT CCCCCAGCCT GGCCCGAGGC ACCAGGAACA GGCCTTGTTG CTGGTGGCGG CCTTGGCGGG 000480 000481 CCTGGGCTTG GGCCTGAGCC TCATTTTCAT CGCTGTCTAC CTCATCCGCT TCTGCTGCTG CCGGCCCCCC GAGCCCCCCG 000560 000561 GGTCCAAGAT CCCCTCGCCC GGGGGAGGCT GCGTCACCTG GAGCTGCATT GTCGCCCTTC TCGCCGGCTG CCCACTTCAG 000640 000641 Cgcacagcag gaaggactgt cccatttgat ggatggagaa agtgaggctc tggagaggaa gtgaatcaag ggcagc |
Predicted Small Protein
Name | NONHSAT067911_smProtein_158:364 |
Length | 69 |
Molecular weight | 7346.656 |
Aromaticity | 0.0882352941176 |
Instability index | 68.3470588235 |
Isoelectric point | 6.79083251953 |
Runs | 13 |
Runs residual | 0.0506756756757 |
Runs probability | 0.0417159240688 |
Amino acid sequence | MPEPCLIFVSFFGCVFLPVPPSISLSLSFCSVFTLPVSISESCIHTHTHVATQPLVPSLG DKLRRCGV |
Secondary structure | LLLLEEEEEEELLEEELLLLLLEEEEEEEEEEEEEEEEELLLEEELLLEEELLLLLLLLL HHHHHLLL |
PRMN | LLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLL |
PiMo | ooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiii iiiiiiii |