NONHSAT067917

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT067917

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

11153 nt

Genomic location

chr19-:54948912..54960064

Exon number

1

Exons

54948912..54960064

Genome context

Sequence
000001 cgtgatctct gctcactgca acctccgcct cctgggttca aacaattctg cctcagcctc cggagtagct gggattacag 000080
000081 gcgcgcgcca ctatgcccgg ctaatttttg tgtttttagt aaagacgggg tttcaccatg tcggccaggc tgttctcgaa 000160
000161 ctcctgacct cgtgatccct ccgtctcggc ttcccaaagt gctgggatta cgggcgtgag ccaccgtgcc cggccGCAGC 000240
000241 CTTGTTTTGA CTGAGTCAGT GGGAGCCATT ACTGTTCCTA AATGTAAACT GGCGTGACAG GAGTTCCGGG ATTGTCCACA 000320
000321 GCACGGTGAT GTGGAAGCCC TGGGGAGAGA ATGATAAAGA AAGGGGATGA GGAACAGCTC CACCCGGAAG AGCGGGCTTC 000400
000401 CCTAGCAAAT GAATCTGGAA GGGCGCAGGG GAGGGGGCAC GGCGAGTTCA GATGGACCGA GGCTGGAAGC TGACGCGGTT 000480
000481 GGAGGGGGAT GGGTGTAGCT GTTGGCAGTG GCGCTGGGGT GGAAGTGTGT GGGGTCACAG ATGTGTAAGG GTGGGCGCGG 000560
000561 AGCAGACCCC CGAAGGTCCC TGAGGTCAGG CTGAGGCATT GGACCAAATC CGTACATAGG CATTTCTCTG AACTGCGCGC 000640
000641 CACCTTTTGA GTGCCATCTG TTTCCGTCCA GGACTCTGAT ACAACTATCC AGTCCGCTGC AGGGACCGGT CACTGCGTCA 000720
000721 CAGTAAGTGG TGGGATTTAA GAGGCAGTTT TCCTCCTCAT GTTCTACCAT TATGAACGTC TAGCTTGAAA AATACATACC 000800
000801 ATTTTCATAA CTACGTATTA TTTTGTTAGT GCTAGCATAG TAGATCTTTT TCCGTTATTT TACTCTGTGG GGGGGGGGGG 000880
000881 GTTTGttttg tttttgtttt tgttttcttt ttgGTACtaa gctttttgtt ctggaataat tttggattta ttcaaaacgt 000960
000961 tgcaaagacc gggcgcgctg gctcacgcct gtaatcccaa cactttggga ggccgagatg ggtggatcac ctggggtcag 001040
001041 gagttcaaga tcagcctggc caacatggtg aagtcccgtc tctactaaaa atacagaaat tagctgggcg tggtggcgcg 001120
001121 tgcacctgta atcccggcta ctcgggaggc tgaggcagga gaatcgcttg aacccaggag gccaaggttg cagtgagccg 001200
001201 aggttacacc attgcactcc agcctgggca acaagagtga aattcttgtc tcaaaaaaaa aaaaaagaaa agttgcaaag 001280
001281 atcatacgca gtccaccatg ttttatgctc agtttcttct gatgctgtca tcacaagcac caacaaaagt ggtttgttgt 001360
001361 agatactgac atgatgcatt actgtaacta aaacccagac tttactggga tttcaccacc ttttcctcca atgttttctt 001440
001441 tacatgccag ggtacaagcc aggacccacg ttccatttag cttcctttta cctgttgtat ttagggtggg tttcttgtag 001520
001521 atagcatgta gttggatctt gctttttttt gcccaagcga acagtctctg ccttttaaaa gaggtgttta taactgtact 001600
001601 tttatttttt atgtcttatt CTTTAGCATT CTGTACACAG ACACAGCGAT AAAATGAAAT GACTGGAACT TAAATGTGAA 001680
001681 AACTCTTTAC AAGTAAGCCC ACAATTAGAT ACATTTATCT TACATGTCAG GGAAAAAAAT TATGTAAACA GGACAAATTA 001760
001761 TATCACAAAA GAATCCCAAA GTAGAAAAAA TACCTAAGAA ATGTGTCTAA CCATGAAAAG TACTGTTCTC TTGGTGTCTT 001840
001841 CACATCGTGT CTTCTGTGTA CTTAAGTACA AAACATTGTT GCCTCTGATT AATGCACCCT GTACTTATTT TTCTGTTGTC 001920
001921 CAGTTACATA TTTGGTTGGT TCCAGGGCTA TGTTCATGTA GCCATCCAGG CAAACCAGCA CCCCTCCCTT AATCCACTTC 002000
002001 AGAATTTTAC CCCAACTGTC TGATGATGTG CTCTAAGAAG TCACTAGGGG ATTGCTTTTC TTAAAAAATC TAttattatt 002080
002081 attatttttt gagacggctc tgtcgcccag gctggagtgc agtagcacga tctcagctca ctgcaacctt tgcctcccag 002160
002161 gttcaagcaa ttctctttac aggcgtgcac caccacaccc agctaatttt tgtattttta gtgaagacgg ggtttcacag 002240
002241 tatctggaat tccggacctc aggtgacccg cccgcctctg cctcccaaag tgccgggatt acaggcatga gccactgcgc 002320
002321 ctggccAGTA GGGGGTTGCT TCTGAAAACT TATTTTAATA ATCTTGGGTA ggccaggcgc ggtggctcat gcgtgtgatc 002400
002401 ctagcacttt gggaggccga ggcgtgtgga tcacctgagg tcaggagttc aagaccagcc tggccaacat ggcgaaaccc 002480
002481 cgtctctact aaaaatacag aaaaattagc cgggcatggt ggcgcatgcc tgtaatccca gttactcatg aggctgaggc 002560
002561 aggagaatcg ctagaaccct gggggtggag gttgcagtga gcccagatca tgccattgca ctccagcctg ggagacagag 002640
002641 cgaaactctg tttcaaaaaa taataaTCTt ggggggcagg aaacctaagt cataatcccg gctcttttac ttaaccagcc 002720
002721 gtatgacttg gaaaactcgt ttcccttctc tcggctccag attcctcatc tTGCAGCTGG GATCCAGAGC TCTCACTCCA 002800
002801 GGAGCCCAGT CACAGCAAAA ACCAAAACTG TACttttttt ttttttttga gacagggttt ctcattctgt cacccaggct 002880
002881 ggagtgcaat gatgtgatct ctgtctcagc ccacagcagc ttcaacctcc caggctcaag tgatcctcct gcctcagcTA 002960
002961 CGCAGTGTAT GGTATTTTGT TACAACAACC AGAATGTAGT AAGAcattta ttgaaggata tcttggttcc ttccaagttt 003040
003041 ttggcagtga taaagaaagc tgccataaac gtgcacgtgc agatttcttt gtgggcagaa gttttcaacc catctgtgta 003120
003121 aatactgggg agcagtgttg ctggttcata ttctaagagt atgtttagga ttatgagaga ccaccacact gtcctccaaa 003200
003201 gtagctgtac cattctgcat tgccagcacc aatgaagaag ggtttctgtt gctccacatt tctgccagca tttggtggtg 003280
003281 ccagcatttt ggatttggca ttctaatagg tatgtagtgg tgtcttgttt tttttttgtt tttttgagac agagtctcac 003360
003361 tctgtcttcc aggctagagt gcagtggcat ggtctcggct cactgcaacc tccgcctcct gggttcaagc gattctcctg 003440
003441 cctcagcctc ccgagtagct gggactacag gcgtgcgcca ccacgcccag ctaatttttg tatttttagt agaaacgggg 003520
003521 tttcaccatg ttggccagga tgatctcgat ctcttgacct cgtgatccac ctgccttggc cttccaaagt gctgggatta 003600
003601 caggtgtgag cccccgcgcc cggccagtgg tgtcttgttt taatggacgg ttccctaatg acatacggtg aacatctttt 003680
003681 cctgtgttta tttgccatct gtattagggt tctccagagg gccagaacta acaggatata tgtatatatt gaaagggagt 003760
003761 atattaggga gaactggctg acaggatcat caggcaaagt cccactatag tccatctgca agctgaggaa ggaagaagcc 003840
003841 agtcacgtct caaagtccaa aagcctcaaa agtagggaag ccaacggcgc agccttcagt ctgtggcgga aggcctaaga 003920
003921 gtccccgaca aaccactggt ggaagttcaa gagtccaaag gccaaagaac ctggagtcta atctccaaag acaggaagta 004000
004001 tccagcacag gagaaagatg aaagccagaa gactcagcaa gccagcccct cccaccttct gcgctgactg gatggtgccc 004080
004081 acccacactg agagtgggtc tccctctccc cgtccactca ctcaagtgtc agcctccctg gcaacaccct cacagacaca 004160
004161 cccagaaaca atcctttttt tttttttttt tttttttttt tttttttttt ttgagaccga gtctcactct gtcacccagg 004240
004241 ttggagtgca gtggcaccat ctcggctcac tccaacctcc gcctcccggg ttcaagcaat tcttctgcct cagcctcccg 004320
004321 agtagctggg actacaggca cgtgccatca tgctggctaa tttttgtatt tttagtacag ggtttcacca tattggccag 004400
004401 gctggtctca aattcctgcc cgtcttggcc tcccaaagtg ctgggattac aggtgtaagc caccatgcct ggccCCTTTT 004480
004481 cctatttttt aatcagattg ttttcctgtt aactgagttt taagagccct ttgtaaatct tggatagcag tccttcatga 004560
004561 gataggtctc ttgcaaatag tttctcccag gctgcagctt ttctcattat attaaaaatg tttttcaaag agcagagggt 004640
004641 tttgttttgt tttgtttttt gagatggagt ctcgctctgt cgcccagtct ggagtgcagt ggcgtgatct cggctcactg 004720
004721 caagctccgc ctcccgggtt cacgccattc tcctgcctca gcctcctgag tagctgggac tacaggcacc tgccaccaca 004800
004801 cctggctaat tttttgtatt tttagtagag atggggcttc accgtgttag ccaggatggt ctcgatctcc tgacctcgtg 004880
004881 atccgcccgc ttcggcctcc caaagagctg ggattacagg cgtgagccac cacgcctggc ctagcagagg ggttttttta 004960
004961 ttattatttt aataaagtca agcttgtaag tttctttcat ggatcatgcc tttgatgttg tatcaaaaaa attatcacgg 005040
005041 ctgggcgtgg tggctcacag ctgtcatccc agtattttgg gaagccgagg tgagtggatc acttgaggcc aggagtttga 005120
005121 gaccagcctg gccaacgtgg caaaacccca tctctactaa aaatacaaaa attagccggg cgtggtggcg cacacctgta 005200
005201 attccagcta ctcaggaggc tgaggcatga gaatcacttg aacccaggag gcagaggttg cagtgagcca agattctgcc 005280
005281 agtgcactcc agcctgggcg acagagtgag actcttgtct caaaaaaaaa aattcacaaa acccagtcat gtaggttttc 005360
005361 tcctatgtta tcttctagga gttttataga tttgcattta acattcagct ctatgatcca ttttgagtta atttttgtga 005440
005441 agagactaag gtctgtgtat agatttgatt tatttatttt tggcatgttg atgtccagtt gttctagcac catttgtgga 005520
005521 gaGAAGTTTG GAAGTTTGAG CATTTTTTAT GATACCtttt tttttttttt agacggagtc tcactgtcat gcaggctgga 005600
005601 gtgcagtggc acagtctcga ctcactgcag cctactcctc ccaggttcaa gcagttctac tgcctcagcc tcccaagtag 005680
005681 ctgggattac aggcgtgcac caccacaccc agctcctttt tgcattttta gtagagacag ggtttcacta tattggctag 005760
005761 gctggtctca aactcctgac ctcgggatct gcctgccttg gcctcccaaa gtgctgggat tacaggtgtg agccaccacg 005840
005841 cccagccTTA TGATACTGTT CTATCTCTGC TCTgtgccca ccaccacacc cagctaattt ttgtattttt tggtagagac 005920
005921 ggggtttcac catgttggcc aggctggtct cgaactcctg acctcaggtg atacgcctgc ctcagcctcc caaaatgctg 006000
006001 ggattacagg tgtgagccac tgcgcctggc cTTGTCTTCA Cttttgtttt tttggttttt tttttgagag ggagtcttgc 006080
006081 tctgtcgccc agtctggagt gcagtggcgc gatctcggct cactgcaagc tccgcctccc gggttcacgc cattctcctg 006160
006161 cctcagccgc ccgagtagct gggaatacag gcgtccacca ccacgcccgg ctaatttttt gtatttttag tagagacggg 006240
006241 gtttcactgt gttagccagg atggtctcga tctcctgacc ttgtgatccg cccgcctctg cctcccaaag tgctgggatt 006320
006321 acaggtgtga gccaccgtgc ccggccCACT TTTGAAAAAC AGTTTCAGTG AGtatcgaat tctaggttga ctactttttt 006400
006401 cttttgctac tttaagaatt ttcttacact gctttctcac attgtttcca gtgagaaatc tggtgtcatc ctaatttttg 006480
006481 ttcctctgtt tataaaatct ttttgttttt catctggctg ttgtcaagat tttctctttg ttactggtct taagaaattt 006560
006561 gattatgatg tatcttggtt tatctttgtg tttcttctgc ttggggtgtg ttgagtttct tgtgtctttg gttttatagt 006640
006641 ttgtatcaaa tttgggaaat ttggggttat tatttcttta aacactctct ctgttccttt ctttctctct ccttatgggc 006720
006721 ctccagttac acatatatta aaatgtccca cagctcacca gtgttctttt cattaaaaaa aaatatattc attccttctg 006800
006801 gggcagggca tggtggctca tgcctgtaat cccagcactt tgggaggcca aggcagtagg atcacttgag cccaggagtt 006880
006881 tgagaccacc ctgggcaaca tggtgagacc tcatctctac agaaaatttt taaagattag ccaaacatgg tggtgtgcgc 006960
006961 ctgtagtccc agctactcga gaggctaaag tgggaggatc gcttgagctg gagaggttga ggctgcagtg agtcatgatc 007040
007041 acgccagtgc actccagcct aggtgacaga gtgagaccct gtctaaaaag taaaaaaaaa aaaatcattt ttttaaatgt 007120
007121 ttcatttgga cagtttctaa tgttgtcttc cagatttttt tttttttcct gcaatgtcta atctgctgtt ctagggctgg 007200
007201 gtgcagtggc tcgcacctgt aatcccagca ctttgggagg ccgaggctgg cagatcattt gaggtcagga gtttgagacc 007280
007281 agcctggcca acatggtgaa agcccgtctc tactaaaaat acaaaaatta gctggatgtg gtggcaggtg cctgtagtct 007360
007361 cagctacttg ggaggctgag gcatgagaat tgcttgaacc tgggaggtgg aagttgcagt gagcctagat catgccactg 007440
007441 cactacagcc tgggcaacag agcaagactc tcccccaaaa aacaaaaatc tgctgttcca gccagtacat tatttatttc 007520
007521 agacattgta atttctatct gttgatatcc agtttgagtt tttttatatc ttccgtatct gtaaagaact tttggaacgt 007600
007601 atggagtaca gtataatagt tgttctaatg ttcttaccta ctaattctaa ctcctgggtc cgtttcagtt gaatgatttt 007680
007681 tatcctcatg atgtgcccta ttttcctgct ttttgcatat ttggtgactt tgttgttgga tactagacaa tatcagtatt 007760
007761 accttgtcga gcactcgtta cttttgtatg cctataaata ttcttgagct ttgtttgaga atgcagtcac cttacttgga 007840
007841 agcagcttga tcctttcagg ttttgctttt aagattcctc aggcaggacc agaacagtgt ttaacaggtt agggctgctt 007920
007921 attccccacg gctgatgtaa gaccctctcc gtgttctacc cagtgttcct tcagttatga ggttcttctg gcaggaacag 008000
008001 cgccttgtca aggcctgtgt gagtccccag aactcaggcg ctatttgctt cagtccctcc aggtggttct ttccctggcA 008080
008081 TTCTAGTctg cagtaacaga ggaccatgga ctggtggctc aaaaacaaca aacacttatt tctcacagtt ctggaggctg 008160
008161 gaagtccaag atAAtttatt tttattttta tttatttatt ttttgagatg gagtctcgct ctgctgccca ggctggagtg 008240
008241 caatggcgcg atcttggctc actgcaacct tcgcctccca ggttcaagag attcccctgc ctcaggctcc cgagtagctg 008320
008321 ggactacagg cacccaccac tacacccggc gaatttgtat atatttagta gagacagggt ttcaccatgt tggcaaagct 008400
008401 ggtctcgaac acctgagttc aggtgatcta cccacctcgg tctcccaaag tgctgggatt acaggcgtga gccatcgcac 008480
008481 ccggccCATA ACTTCATTCT CAAAACAAAG CTCAAGAACA AAGCTCAgac tccctgcttt gtctcctctg ctcacggagt 008560
008561 cctcccagct ccgcctcagt cttccctccc tgtcccgtgg tctagaaact tgcaacagga cccagcggca attttagggc 008640
008641 ttgccttgat gtttcccgtt cctcagggat cactttcttg gtagagtctt gaccactgtt gttttcttgt atttactcta 008720
008721 tttttggggg gtcaagtcca gtctctgtga ctccatcctg gtcgcagtgg aagcccccAT AGGTAACATT CTAAAAATAA 008800
008801 CACTGGATTT TCCTTTTGTA AAGTTTGGGT AAAATGCCtt tttttttttt tttttttttt ttgagacgga gtcttgctct 008880
008881 gtcgcccagg ctggagtgca gtggcgcgat ctcggctcac tgcaagctcc gcatcccggg ttcaggtgat tctcctgcct 008960
008961 cagcctcctg agtagctggg attgcaggcg cccgccacca tgcccagcta atttttgtgt ttagtagaga tggggtttca 009040
009041 ccgtgttggc caggctggtc tcaaactcct gacctcaggt gatcgcctgc cccagcctcc cacagtgctg ggattacagg 009120
009121 cgtgagccag ggtgcccggc cAACTTCTTG TTGAGAGATC ACCCCCAGGC TCATTGGCAT GGGAGATCAA GCAGCTGAGT 009200
009201 CTCAAGGTAC TTTGCAGCCG CCCAACAGCC AGCGGATGCC TGTGCTTGGG AAATGGGCTC AGGGGCACTA GAGGGCAGTG 009280
009281 TTTGAGAGGA AAGAAGTCAG CATAGCAGCA GGGCCGGGCC TGGGGCAGAC AGCCCACATG GTTAGGAAAA AGTGAGTGAA 009360
009361 CGCATGTGGC CCCCAGAACC CCTCCCTGAA ATTGCAGTTG ATTTTTATTC CCACCGTCAG GCCCACATAT CTAAAGCTTC 009440
009441 CTCTGAACGC TCCTTGCAGT ACACAAAATA GAAATGATTG ACAGGCACAG AGCAGCAGCA GGCCCCACGC TGTACACCAG 009520
009521 CATCTGGCAC TGTGggtcac caagcaccaa ctcgatcccc tcggagccag gtgtgtgttg agattcagga tttttcagtt 009600
009601 gcaaaggcaa tatgatctct actccacagg gcacacggca ccctcagtgc tcagcacagc agtgtgcagc agcctggtta 009680
009681 acttttctgc agggaagtat gtgaacgttc acaccaagcg tgtcagtcat gtctgtaagt catctcccac caacacaggt 009760
009761 caggttttcc tgcccaatga gcttggggat ggcttgactt tggagctctt tggatctgtg gattttggaa ttttggattt 009840
009841 ctgatacccg tttgatcaaa gaggcaaccg aggtctaacg ggtcaagtga ctttcccata tccgtgaagg tcatgaaaag 009920
009921 cagggccagg atggtggcct ggggtgcctt gaatgataag ctgggccctt cactgtgcag gcccctctCC TTCAGTCCAC 010000
010001 TCTGCCACTG CTGTCTGCCA CACCCTGCTC TGATAGCTCC TCTCTGCCAG GCTTTTCCCT CACATCCTCA ACTCAGCCAA 010080
010081 GAGCTGGTTT CTTCCAGAGA GCCCTGCTGT GCAGTCAGTT ATTGGACTTC TCTTTTTGTG CATGTTTGTT TTCAGGGTTT 010160
010161 AGCTGATCAA AGTGGTATCG TTGTAACAGG CAGCTCTAAA TAGAAGTCTT CAGAAGCCTG TGTGTCTTtt tctgtaaatc 010240
010241 aattcccaaa agcaggattg ttggggcatg gggtgtatgc agttttgatc tgatcacata caagcgcatt tttttttttt 010320
010321 ttcaagggat ggtggcagct cacagcctca ggagaagtgt tttgagtgcc tgttcctcta ggtcctcgcc cgcccaggac 010400
010401 atcaccactc ttgttaattt cattgtgtct aggtagtgaa aaagtgtagt ttctcattct ttcaaattgc atttcccaat 010480
010481 tattagagtt tgaatctttt tgtctgttta ctgatgttgg aatttttatt gagtattcaa ctcaattgat tacttttaaa 010560
010561 tgggttgtct ttttcttagt ttatgaaagc ttttgtagat tATATCTTTT AAGAATAACA TTTCTGCATC ATAACTGTTA 010640
010641 acatacacac acacacacac acacacacac acacacacac acgcacgcac acactcacTG TTCCCCAGTC TGTCAATTTG 010720
010721 CCATTTGACT TTACGGTATG TTTTTCAATC TATAATTTGC CAACTAAGCT ATCTTTTCCT TTCTGGTTTT ATGATCTCCT 010800
010801 GCTTAAACTC CTCCCTCCCC ATTTTCCCTA CCCAGATACA TGACATGCAG ACAATATACA AATATTCTCC TAATTTCTCT 010880
010881 GGtttgtttt gttttgtttt gtttttttct gagatggagt ctcacttgat ctcccaggct ggagtacagt ggtgcaacct 010960
010961 ccacctcccg ggttcaagca attctcctgc ctcagcctcc cgagtagctg ggcttacaga cctgtgccac catgcccagc 011040
011041 taattttttt tttctttaag tagagacggg gtttcaccat gttggccact ctgctctcaa actcctggcc tcaagggatc 011120
011121 cacccacctt ggcctctcaa aatgctggga tta
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Predicted Small Protein

Name NONHSAT067917_smProtein_10790:11062
Length 91
Molecular weight 10104.5571
Aromaticity 0.144444444444
Instability index 46.7933333333
Isoelectric point 6.47357177734
Runs 14
Runs residual 0.01569664903
Runs probability 0.0462500315441
Amino acid sequence MISCLNSSLPIFPTQIHDMQTIYKYSPNFSGLFCFVLFFSEMESHLISQAGVQWCNLHLP
GSSNSPASASRVAGLTDLCHHAQLIFFFFK
Secondary structure LEEELLLLLLLLLLLLLLHHHHEEELLLLLEEEEEEEEEHHHHHHHHHHHHHHHHHLLLL
LLLLLHHHHHHHHLHHHHHHHHHHHHHEEL
PRMN -
PiMo -