NONHSAT068178
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068178 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
758 nt |
Genomic location |
chr19+:57106703..57121911 |
Exon number |
3 |
Exons |
57106703..57106796,57112875..57112959,57121333..57121911 |
Genome context |
|
Sequence |
000001 GGCTGCGGGG TCGCGCCCAC CCTCTACCTG TGCCGGGGGC CGGAACCTGG CCCCGGGGAG GGCGCGGCCT CGGGGAGACG 000080
000081 GCGTGCAGGC CCAGCACTGT TGGTCACCGC AGGCCTGTCT TCCTATTCAC CGTGGGCAGC AGAGGGATGG CTGCTCAGCT 000160 000161 GCTGACTGAT GAGGCACTGg ttccttcatg ttgcagcgtg tgtcagagct gtcgtgtgga cgaaccacat tgtttatcca 000240 000241 ttcgtcagga gatggacatt tgagtcgttt ccactttggg actattgcga gtaacattgc tatgagcatc agtgtatagt 000320 000321 ttttgtgtgg cactctgttt tcatttttct tagatatcta ccaagaatgg aagtgctagg tcataaggta actctgtgtt 000400 000401 tattcacttg aggaaatgcc agactgtctt ccaaagcagc tgaaccattt tacatcccca ccagctgtgc atTCTTACCA 000480 000481 GTTTCTTGCA TTCACTTCCA TAAAGAGGTC TGCGCCTGTa taagcacata tgtgtaaatt tccctttatt atttcctctt 000560 000561 atggaaatgt taacaaacta gacacactgt tctgggcatt gatctgtttt ttcatgtaac agtatattcg ggagatcatt 000640 000641 ctgcacctgc agctaagggg ctgccccctt tttttttgtt atggctgtgt gtattccact gtggtggatt cactgacctg 000720 000721 atttatccaa acccctactg atggccattt gggatgtg |
Predicted Small Protein
Name | NONHSAT068178_smProtein_146:262 |
Length | 39 |
Molecular weight | 4195.8401 |
Aromaticity | 0.0 |
Instability index | 66.1763157895 |
Isoelectric point | 4.29022216797 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0 |
Amino acid sequence | MAAQLLTDEALVPSCCSVCQSCRVDEPHCLSIRQEMDI |
Secondary structure | LHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHEELL |
PRMN | - |
PiMo | - |