NONHSAT068531
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068531 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1046 nt |
Genomic location |
chr2-:308943..314271 |
Exon number |
5 |
Exons |
308943..309407,310215..310393,311488..311659,312957..313157,314243..314271 |
Genome context |
|
Sequence |
000001 TTCAGGCTGG AGCTGATGAT GCCACACAGA AAATAGACTC TACTTAGAAA TGAAACTCAA CTAAAGGTAA AAGTTGTCAG 000080
000081 GAACATCTCC AAGAAAGCCA GAGTCAGCCT CTAAACTTTG CATCAAGAAC GCAATGGCTT CCCTGAGGGC CCAGGGACGC 000160 000161 GTGGCAGCTG TGAGGCAGCC CCTTCTCTGC TGTCGAGGAA CTGGACACTT CTCCTGTCCC TTCCCACAAG ATATAAAAGA 000240 000241 TTCAGGACGT AGTGCTCGTG GTTGGGGTCG GGGACATGGC AAGACAGGAG CGGAAGAGAG AGACGGAGAA GACGCAGGGG 000320 000321 AACTGCATCT GCCTCTGCTG CTCAGGAACA GCGTTGAGAC CGGCGCAGGG ACCATGGGTG GGAGAGTCCT GATGTACTCA 000400 000401 ATGGGCTTCC TGGAGCTCCT GCAACCCCAG GCATTAGTTC CGGTGCAGTT CTAGGATCAG ATCAATTCAC TCGACAACAA 000480 000481 GAGAAACAAA TGGAGATTCC TACACAAAGA CTTTCAAGCA CAAAGAAATC CTGCTGCCTG TAAAGCGGAG CTGCCTCAGC 000560 000561 CCTTGATGAA CGACAGAAAA TACCACCTAC TGCCAGACCT CAACGCCTCA CAaaactctc acccacctac tgcttttagc 000640 000641 tcacattcca ggaattcaga tgaagtgaag tgctctcatg gggaccaggc atggttatgc cagtccactg ccctgcaagc 000720 000721 ctcaagggaa gccaactgcc cttcagcaag tcacacctgc cttggtggag GCCTTGATTG GAAGTGCCAC ACGCTACATG 000800 000801 TCCAGTCCTG AGCGGGAGAA TCGGTGTAGG GACGTTCTGG GGATGCCAGC TGTGGCCAGA TCAGGTCCAA CTACAGAAGA 000880 000881 ATAATGAAGA CTCCACCTGA GGGCTGGAAA AACAAAACCT CAAGTGTGAG GCAGCCAACC TGTTACCTCG AGGGACTGTT 000960 000961 CCGCAGCACA GCGGGGCCAT GGGAACAGCA GCAGACACCC CGACCTCCTC GCTACCTGTG TGTGTATTAA CACGCCGGCC 001040 001041 TCCTCG |
Predicted Small Protein
Name | NONHSAT068531_smProtein_677:883 |
Length | 69 |
Molecular weight | 7268.2354 |
Aromaticity | 0.0294117647059 |
Instability index | 74.8455882353 |
Isoelectric point | 8.80157470703 |
Runs | 9 |
Runs residual | 0.00814785373609 |
Runs probability | 0.0440244165735 |
Amino acid sequence | MGTRHGYASPLPCKPQGKPTALQQVTPALVEALIGSATRYMSSPERENRCRDVLGMPAVA RSGPTTEE |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHLLLEELLLLLHHHHHHHHLLLLLEE LLLLLLLL |
PRMN | - |
PiMo | - |